RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 CALM2P0DP24 149 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 CALM3P0DP25 149 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 KANK3Q6NY19 840 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 FAM114A1Q8IWE2 563 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 ANKRD2Q9GZV1 360 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 WDR70Q9NW82 654 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 CCDC91Q7Z6B0 441 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 USP37Q86T82 979 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 ARHGAP45Q92619 1136 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 RBM8AQ9Y5S9 174 aaKnown RBP16.2■□□□□ 0.18
UBE3A-220ENST00000630424 SP4Q02446 784 aa16.2■□□□□ 0.18
UBE3A-220ENST00000630424 ACTN2P35609 894 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 TNNI2P48788 182 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 EYA1Q99502 592 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 A2MP01023 1474 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 AFMP43652 599 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 SPECC1Q5M775 1068 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
UBE3A-220ENST00000630424 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
UBE3A-220ENST00000630424 N4BP3O15049 544 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 PDE1AP54750 535 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 ZNF354CQ86Y25 554 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 PLCD3Q8N3E9 789 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 FERMT1Q9BQL6 677 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 KIF2AO00139 706 aaPredicted RBP16.18■□□□□ 0.18
UBE3A-220ENST00000630424 SDSP20132 328 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 MAGEB6Q8N7X4 407 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 AKR1B10O60218 316 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 STAT6P42226 847 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
UBE3A-220ENST00000630424 CCDC66A2RUB6 948 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 BMP15O95972 392 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 KRT13P13646 458 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 HLTFQ14527 1009 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■□□ 14.6
UBE3A-220ENST00000630424 FAM98CQ17RN3 349 aaKnown RBP16.17■□□□□ 0.18
UBE3A-220ENST00000630424 FAM89AQ96GI7 184 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 SYKP43405 635 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
UBE3A-220ENST00000630424 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 BACH1O14867 736 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 UFL1O94874 794 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 ZNF165P49910 485 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 TMX1Q9H3N1 280 aa16.17■□□□□ 0.18
UBE3A-220ENST00000630424 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
UBE3A-220ENST00000630424 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 TMC6Q7Z403 805 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 KIF18AQ8NI77 898 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 IMPG2Q9BZV3 1241 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 PABPN1LA6NDY0 278 aaKnown RBP16.16■□□□□ 0.18
UBE3A-220ENST00000630424 ESPNB1AK53 854 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 ALS2CR12Q96Q35 445 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 ZBTB21Q9ULJ3 1066 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
UBE3A-220ENST00000630424 CDCA7Q9BWT1 371 aaPredicted RBP16.16■□□□□ 0.18
UBE3A-220ENST00000630424 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-220ENST00000630424 GNAT2P19087 354 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 ASIC1P78348 528 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 STX1AQ16623 288 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 RRP36Q96EU6 259 aaKnown RBP16.15■□□□□ 0.18
UBE3A-220ENST00000630424 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-220ENST00000630424 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 TAOK3Q9H2K8 898 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 TBX22Q9Y458 520 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
UBE3A-220ENST00000630424 CASQ1P31415 396 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 MAP2K1Q02750 393 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-220ENST00000630424 IP6K1Q92551 441 aa16.15■□□□□ 0.18
UBE3A-220ENST00000630424 SH3TC1Q8TE82 1336 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 TMCO3Q6UWJ1 677 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 Q6ZUG5 572 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
UBE3A-220ENST00000630424 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
UBE3A-220ENST00000630424 CCDC172P0C7W6 258 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 CHST3Q7LGC8 479 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 LARGE2Q8N3Y3 721 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 HOXC9P31274 260 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 KRT79Q5XKE5 535 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
UBE3A-220ENST00000630424 TFCP2Q12800 502 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 RBM27Q9P2N5 1060 aaKnown RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 RPRD2Q5VT52 1461 aaKnown RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 CUL7Q14999 1698 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms