RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 CCDC57Q2TAC2 916 aa11.14□□□□□ -0.63
CHD2-216ENST00000629104 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
CHD2-216ENST00000629104 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
CHD2-216ENST00000629104 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
CHD2-216ENST00000629104 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
CHD2-216ENST00000629104 NSFL1CQ9UNZ2 370 aaKnown RBP11.14□□□□□ -0.63
CHD2-216ENST00000629104 GNAI3P08754 354 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 RLBP1P12271 317 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 AOC3Q16853 763 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 MPHOSPH8Q99549 860 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 VPS33BQ9H267 617 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
CHD2-216ENST00000629104 XDHP47989 1333 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 PPIP5K2O43314 1243 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 KIAA2012Q0VF49 1180 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
CHD2-216ENST00000629104 ZNF594Q96JF6 807 aaPredicted RBP11.12□□□□□ -0.63
CHD2-216ENST00000629104 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
CHD2-216ENST00000629104 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 PLIN1O60240 522 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 UFL1O94874 794 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 MS4A1P11836 297 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 ZNF526Q8TF50 670 aaPredicted RBP11.11□□□□□ -0.63
CHD2-216ENST00000629104 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 GGA1Q9UJY5 639 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
CHD2-216ENST00000629104 KDM2BQ8NHM5 1336 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 FZD9O00144 591 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 CHRNDQ07001 517 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 NIM1KQ8IY84 436 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
CHD2-216ENST00000629104 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
CHD2-216ENST00000629104 EYA3Q99504 573 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
CHD2-216ENST00000629104 CNNM1Q9NRU3 951 aa11.1□□□□□ -0.63
CHD2-216ENST00000629104 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 PSME4Q14997 1843 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 ZBTB7BO15156 539 aaPredicted RBP11.09□□□□□ -0.63
CHD2-216ENST00000629104 GNAI2P04899 355 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
CHD2-216ENST00000629104 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 PUS3Q9BZE2 481 aaKnown RBP11.09□□□□□ -0.63
CHD2-216ENST00000629104 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
CHD2-216ENST00000629104 SCN9AQ15858 1988 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 SCN4AP35499 1836 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 TAF5LO75529 589 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 MTX1Q13505 466 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 MVPQ14764 893 aaKnown RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 ZC3H12CQ9C0D7 883 aaKnown RBP11.08□□□□□ -0.64
CHD2-216ENST00000629104 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 ZNRF3Q9ULT6 936 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 RIPOR2Q9Y4F9 1068 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 ZNF804BA4D1E1 1349 aa11.08□□□□□ -0.64
CHD2-216ENST00000629104 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 ZBTB22O15209 634 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 LRRC24Q50LG9 513 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
CHD2-216ENST00000629104 DBNDD1Q9H9R9 158 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
CHD2-216ENST00000629104 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
CHD2-216ENST00000629104 SNAP23O00161 211 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 EYA2O00167 538 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 ECE2O60344 883 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 KCNJ4P48050 445 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 CXCL9Q07325 125 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 C20orf194Q5TEA3 1177 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 GPC2Q8N158 579 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 IRS2Q9Y4H2 1338 aa11.06□□□□□ -0.64
CHD2-216ENST00000629104 PNMA6EA0A0J9YXQ4 647 aa11.05□□□□□ -0.64
CHD2-216ENST00000629104 POTECB2RU33 542 aa11.05□□□□□ -0.64
CHD2-216ENST00000629104 G3V3G9 751 aa11.05□□□□□ -0.64
CHD2-216ENST00000629104 KIF3CO14782 793 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms