RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 KHSRPQ92945 711 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZNF692Q9BU19 519 aaPredicted RBP4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NBPF3Q9H094 633 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZFYVE28Q9HCC9 887 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZNRF3Q9ULT6 936 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TRPC6Q9Y210 931 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 RAB3GAP2Q9H2M9 1393 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CD163L1Q9NR16 1453 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 KMT2BQ9UMN6 2715 aaPredicted RBP4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MON2Q7Z3U7 1717 aa4.46□□□□□ -1.69
SCARNA4.1-201ENST00000628597 KIF1BO60333 1816 aa4.46□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CYP27B1O15528 508 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TFF2Q03403 129 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ARMC9Q7Z3E5 817 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ZBTB38Q8NAP3 1195 aaPredicted RBP4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SLC10A4Q96EP9 437 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DEFB118Q96PH6 123 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SLC4A9Q96Q91 983 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ZNF576Q9H609 170 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRKAG2Q9UGJ0 569 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 RIPOR2Q9Y4F9 1068 aa4.46□□□□□ -1.7
SCARNA4.1-201ENST00000628597 KIF24Q5T7B8 1368 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 RIF1Q5UIP0 2472 aaKnown RBP4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 RAD17O75943 681 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 FMNL1O95466 1100 aaPredicted RBP4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 CAP1Q01518 475 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SHHQ15465 462 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 UNC93B1Q9H1C4 597 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SPINK5Q9NQ38 1064 aaPredicted RBP4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 FAM86C1Q9NVL1 165 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 GGA3Q9NZ52 723 aa4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 USP9XQ93008 2570 aaPredicted RBP4.45□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SHTN1A0MZ66 631 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRAMEF22A3QJZ6 481 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SOWAHBA6NEL2 793 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PTCD1O75127 700 aaKnown RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SSTR3P32745 418 aaPredicted RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 AMPHP49418 695 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PTPN12Q05209 780 aaKnown RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DMWDQ09019 674 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PUM1Q14671 1186 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 NKX1-1Q15270 411 aaPredicted RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 KANK4Q5T7N3 995 aaPredicted RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 NBPF10Q6P3W6 841 aaKnown RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 GJD3Q8N144 294 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 MICALL1Q8N3F8 863 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ANKLE1Q8NAG6 615 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRSS33Q8NF86 280 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DIS3LQ8TF46 1054 aaKnown RBP4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DPF2Q92785 391 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SETDB2Q96T68 719 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 VPS33BQ9H267 617 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 C11orf49Q9H6J7 331 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SPG7Q9UQ90 795 aa4.44□□□□□ -1.7
SCARNA4.1-201ENST00000628597 COL2A1P02458 1487 aaPredicted RBP4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 COL15A1P39059 1388 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ROCK1Q13464 1354 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ATRNL1Q5VV63 1379 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ERC2O15083 957 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TLL1O43897 1013 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 CAMTA2O94983 1202 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ZBTB48P10074 688 aaPredicted RBP4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TAF1CQ15572 869 aaPredicted RBP4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PKN1Q16512 942 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 AOC3Q16853 763 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 KIF4BQ2VIQ3 1234 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 USHBP1Q8N6Y0 703 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SLAIN1Q8ND83 568 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SUPT20HQ8NEM7 779 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TIFAQ96CG3 184 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRDM12Q9H4Q4 367 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 BCL2L12Q9HB09 334 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SRRDQ9UH36 339 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 COG5Q9UP83 839 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 JAG2Q9Y219 1238 aa4.43□□□□□ -1.7
SCARNA4.1-201ENST00000628597 RGPD5Q99666 1765 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 FAM186AA6NE01 2351 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 A0A087WZG4 1122 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DCXO43602 365 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DSG3P32926 999 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ANGEL2Q5VTE6 544 aaKnown RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 NBPF6Q5VWK0 638 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TBC1D9BQ66K14 1250 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 INTS5Q6P9B9 1019 aaKnown RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 NPM2Q86SE8 214 aaKnown RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HELBQ8NG08 1087 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 RMDN1Q96DB5 314 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 NBPF4Q96M43 638 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HNRNPABQ99729 332 aaKnown RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ARHGAP39Q9C0H5 1083 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SOS1Q07889 1333 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
SCARNA4.1-201ENST00000628597 KDRP35968 1356 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms