RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 PEAR1Q5VY43 1037 aaPredicted RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 PMEPA1Q969W9 287 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 LATS2Q9NRM7 1088 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 SALL4Q9UJQ4 1053 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 NSFL1CQ9UNZ2 370 aaKnown RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 PHF20L1A8MW92 1017 aa6.78□□□□□ -1.32
CDR1-202ENST00000625883 KIF4AO95239 1232 aa6.78□□□□□ -1.32
CDR1-202ENST00000625883 DHX32Q7L7V1 743 aaKnown RBP6.78□□□□□ -1.32
CDR1-202ENST00000625883 C12orf49Q9H741 205 aa6.78□□□□□ -1.32
CDR1-202ENST00000625883 NLRP2Q9NX02 1062 aa6.78□□□□□ -1.32
CDR1-202ENST00000625883 PSAPP07602 524 aa6.77□□□□□ -1.33
CDR1-202ENST00000625883 GAS6Q14393 721 aa6.77□□□□□ -1.33
CDR1-202ENST00000625883 SUV39H2Q9H5I1 410 aa6.77□□□□□ -1.33
CDR1-202ENST00000625883 A0A1W2PP55 124 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 FAM181BA6NEQ2 426 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 GIPC1O14908 333 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 EDN3P14138 238 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 ACPPP15309 386 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 EIF4BP23588 611 aaKnown RBP6.76□□□□□ -1.33
CDR1-202ENST00000625883 PLAURQ03405 335 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 GRM2Q14416 872 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 KIAA0319Q5VV43 1072 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 CNTNAP3BQ96NU0 1288 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
CDR1-202ENST00000625883 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 CNTNAP3Q9BZ76 1288 aa6.76□□□□□ -1.33
CDR1-202ENST00000625883 SCAMP3O14828 347 aaKnown RBP6.75□□□□□ -1.33
CDR1-202ENST00000625883 GADD45BO75293 160 aaPredicted RBP6.75□□□□□ -1.33
CDR1-202ENST00000625883 ITGAEP38570 1179 aa6.75□□□□□ -1.33
CDR1-202ENST00000625883 NRLP54845 237 aa6.75□□□□□ -1.33
CDR1-202ENST00000625883 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
CDR1-202ENST00000625883 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
CDR1-202ENST00000625883 GPR161Q8N6U8 529 aaKnown RBP6.75□□□□□ -1.33
CDR1-202ENST00000625883 TMEM87AQ8NBN3 555 aa6.75□□□□□ -1.33
CDR1-202ENST00000625883 TRPM4Q8TD43 1214 aa6.75□□□□□ -1.33
CDR1-202ENST00000625883 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
CDR1-202ENST00000625883 BMP4P12644 408 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 GPLD1P80108 840 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 HDLBPQ00341 1268 aaKnown RBP6.74□□□□□ -1.33
CDR1-202ENST00000625883 FANCCQ00597 558 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 HYAL2Q12891 473 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 CEP120Q8N960 986 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
CDR1-202ENST00000625883 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
CDR1-202ENST00000625883 METTL16Q86W50 562 aaKnown RBP6.73□□□□□ -1.33
CDR1-202ENST00000625883 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 TCF12Q99081 682 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 SRCIN1Q9C0H9 1055 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 FAM8A1Q9UBU6 413 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 SIN3BO75182 1162 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 TRPA1O75762 1119 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 MX2P20592 715 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 MLLT1Q03111 559 aaPredicted RBP6.73□□□□□ -1.33
CDR1-202ENST00000625883 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 PRPF40BQ6NWY9 871 aaKnown RBP6.73□□□□□ -1.33
CDR1-202ENST00000625883 OSMRQ99650 979 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 EHD4Q9H223 541 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
CDR1-202ENST00000625883 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
CDR1-202ENST00000625883 LOC102724428A0A0B4J2F2 783 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 J3QW42 95 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 NFKBIEO00221 500 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 SIK1P57059 783 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
CDR1-202ENST00000625883 C9orf131Q5VYM1 1079 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 HFE2Q6ZVN8 426 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 C3orf58Q8NDZ4 430 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 TNFRSF25Q93038 417 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 HHIPQ96QV1 700 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 MDFIQ99750 246 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 UBE2OQ9C0C9 1292 aaKnown RBP6.72□□□□□ -1.33
CDR1-202ENST00000625883 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
CDR1-202ENST00000625883 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
CDR1-202ENST00000625883 METTL5Q9NRN9 209 aaKnown RBP6.72□□□□□ -1.33
CDR1-202ENST00000625883 USP31Q70CQ4 1352 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 MAP2K3P46734 347 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 RNFT1Q5M7Z0 435 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 IGFLR1Q9H665 355 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 TRAK1Q9UPV9 953 aa6.71□□□□□ -1.34
CDR1-202ENST00000625883 ARAFP10398 606 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 ZNF76P36508 570 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 ATP11AP98196 1134 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 RAD51AP2Q09MP3 1159 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
CDR1-202ENST00000625883 RASSF4Q9H2L5 321 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms