RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 MCCP23508 829 aa22.28■■□□□ 1.16
PCDHB2-202ENST00000622947 XAGE2Q96GT9 111 aa22.28■■□□□ 1.16
PCDHB2-202ENST00000622947 SNRKQ9NRH2 765 aa22.28■■□□□ 1.16
PCDHB2-202ENST00000622947 FOXD4L1Q9NU39 408 aa22.28■■□□□ 1.16
PCDHB2-202ENST00000622947 ZNF589Q86UQ0 364 aaPredicted RBP22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 LRRC4BQ9NT99 713 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 CLCN1P35523 988 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 NEK4P51957 841 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 METTL24Q5JXM2 366 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
PCDHB2-202ENST00000622947 CASZ1Q86V15 1759 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 MED23Q9ULK4 1368 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 HIP1O00291 1037 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 SLFNL1Q499Z3 407 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 CNNM1Q9NRU3 951 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 SNX14Q9Y5W7 946 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 AKAP2Q9Y2D5 859 aa22.26■■□□□ 1.15
PCDHB2-202ENST00000622947 SPEF2Q9C093 1822 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 GOLIM4O00461 696 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 BICDL1Q6ZP65 573 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 C3orf67Q6ZVT6 689 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 UPF3BQ9BZI7 483 aaKnown RBP22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 CCDC171Q6TFL3 1326 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 TAF1P21675 1872 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 ST18O60284 1047 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 SCARF1Q14162 830 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 ERFEQ4G0M1 354 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 SEC62Q99442 399 aaKnown RBP22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 PAG1Q9NWQ8 432 aa22.25■■□□□ 1.15
PCDHB2-202ENST00000622947 IFIT1P09914 478 aaKnown RBP22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 ATP2B3Q16720 1220 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 PODXL2Q9NZ53 605 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 C4AP0C0L4 1744 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 AKAP11Q9UKA4 1901 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 NECTIN1Q15223 517 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 HELBQ8NG08 1087 aaPredicted RBP22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 MAP4K1Q92918 833 aa22.23■■□□□ 1.15
PCDHB2-202ENST00000622947 PDE8BO95263 885 aa22.22■■□□□ 1.15
PCDHB2-202ENST00000622947 CHMP5Q9NZZ3 219 aa22.22■■□□□ 1.15
PCDHB2-202ENST00000622947 RTCBQ9Y3I0 505 aaKnown RBP22.22■■□□□ 1.15
PCDHB2-202ENST00000622947 SNAP23O00161 211 aa22.22■■□□□ 1.15
PCDHB2-202ENST00000622947 RFX7Q2KHR2 1363 aa22.22■■□□□ 1.15
PCDHB2-202ENST00000622947 PI16Q6UXB8 463 aa22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 KRT27Q7Z3Y8 459 aa22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 CCDC152Q4G0S7 254 aa22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 PRPF40BQ6NWY9 871 aaKnown RBP22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 CCDC129Q6ZRS4 1044 aa22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 KCNB2Q92953 911 aa22.21■■□□□ 1.15
PCDHB2-202ENST00000622947 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 RTL9Q8NET4 1388 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 ABCC12Q96J65 1359 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 RGL2O15211 777 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 TAF5LO75529 589 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 CCDC158Q5M9N0 1113 aa22.2■■□□□ 1.14
PCDHB2-202ENST00000622947 COL9A3Q14050 684 aaPredicted RBP22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 ADCK5Q3MIX3 580 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 TTC39AQ5SRH9 613 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 GORABQ5T7V8 394 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 FAM196AQ6ZSG2 479 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 FGFR2P21802 821 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 FKBP4Q02790 459 aaKnown RBP eCLIP22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 TAF6LQ9Y6J9 622 aa22.19■■□□□ 1.14
PCDHB2-202ENST00000622947 ZPR1O75312 459 aa22.18■■□□□ 1.14
PCDHB2-202ENST00000622947 PHF14O94880 888 aa22.18■■□□□ 1.14
PCDHB2-202ENST00000622947 TRIM37O94972 964 aa22.18■■□□□ 1.14
PCDHB2-202ENST00000622947 CPA1P15085 419 aa22.18■■□□□ 1.14
PCDHB2-202ENST00000622947 MYO5AQ9Y4I1 1855 aaKnown RBP22.18■■□□□ 1.14
PCDHB2-202ENST00000622947 MROH5Q6ZUA9 1318 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 MCAMP43121 646 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 ZAP70P43403 619 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 CREB3L3Q68CJ9 461 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 TMX3Q96JJ7 454 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 ARAP2Q8WZ64 1704 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
PCDHB2-202ENST00000622947 CCDC24Q8N4L8 307 aa22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 ZGPATQ8N5A5 531 aaKnown RBP22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 TTC14Q96N46 770 aa22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 MPHOSPH8Q99549 860 aa22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 MCMDC2Q4G0Z9 681 aa22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
PCDHB2-202ENST00000622947 SLC27A2O14975 620 aa22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 PHKA1P46020 1223 aa22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 SF3B3Q15393 1217 aaKnown RBP22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 SLC10A5Q5PT55 438 aa22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 ZMYM1Q5SVZ6 1142 aa22.15■■□□□ 1.14
PCDHB2-202ENST00000622947 HSP90B1P14625 803 aaKnown RBP22.14■■□□□ 1.14
PCDHB2-202ENST00000622947 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.14
PCDHB2-202ENST00000622947 CCDC102BQ68D86 513 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms