RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 FAM227BQ96M60 508 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 ZSWIM6Q9HCJ5 1215 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 COL16A1Q07092 1604 aaPredicted RBP20.82■□□□□ 0.92
TRA2A-212ENST00000621813 AK2P54819 239 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 TCIRG1Q13488 830 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 PIGBQ92521 554 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.925e-11■■□□□ 13.7
TRA2A-212ENST00000621813 LMBRD1Q9NUN5 540 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.82■□□□□ 0.92
TRA2A-212ENST00000621813 RBM8AQ9Y5S9 174 aaKnown RBP20.82■□□□□ 0.92
TRA2A-212ENST00000621813 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
TRA2A-212ENST00000621813 CIAO1O76071 339 aa20.81■□□□□ 0.92
TRA2A-212ENST00000621813 PSMA5P28066 241 aa20.81■□□□□ 0.92
TRA2A-212ENST00000621813 HAUS7Q99871 368 aa20.81■□□□□ 0.92
TRA2A-212ENST00000621813 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
TRA2A-212ENST00000621813 ZSCAN31Q96LW9 406 aaPredicted RBP20.8■□□□□ 0.92
TRA2A-212ENST00000621813 JAKMIP1Q96N16 626 aaKnown RBP20.8■□□□□ 0.92
TRA2A-212ENST00000621813 HMG20BQ9P0W2 317 aa20.8■□□□□ 0.92
TRA2A-212ENST00000621813 FBXO3Q9UK99 471 aa20.8■□□□□ 0.92
TRA2A-212ENST00000621813 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
TRA2A-212ENST00000621813 CREB3L3Q68CJ9 461 aa20.8■□□□□ 0.92
TRA2A-212ENST00000621813 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
TRA2A-212ENST00000621813 WDR33Q9C0J8 1336 aaKnown RBP20.8■□□□□ 0.92
TRA2A-212ENST00000621813 BCL9O00512 1426 aa20.8■□□□□ 0.92
TRA2A-212ENST00000621813 ANKRD36CQ5JPF3 1778 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 RUFY3Q7L099 469 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 ATG9AQ7Z3C6 839 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 ANKRD7Q92527 254 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 PDRG1Q9NUG6 133 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
TRA2A-212ENST00000621813 RPAP1Q9BWH6 1393 aaPredicted RBP20.79■□□□□ 0.92
TRA2A-212ENST00000621813 EYA2O00167 538 aa20.78■□□□□ 0.92
TRA2A-212ENST00000621813 CERKQ8TCT0 537 aa20.78■□□□□ 0.92
TRA2A-212ENST00000621813 DNAJC10Q8IXB1 793 aa20.78■□□□□ 0.92
TRA2A-212ENST00000621813 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.77■□□□□ 0.92
TRA2A-212ENST00000621813 ZNF609O15014 1411 aa20.77■□□□□ 0.92
TRA2A-212ENST00000621813 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.92
TRA2A-212ENST00000621813 PALLDQ8WX93 1383 aa20.77■□□□□ 0.91
TRA2A-212ENST00000621813 EXOC5O00471 708 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 SLC27A2O14975 620 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
TRA2A-212ENST00000621813 TSGA10IPQ3SY00 556 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 MAP3K15Q6ZN16 1313 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 ADCK5Q3MIX3 580 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 HSP90AB3PQ58FF7 597 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 CDCA7Q9BWT1 371 aaPredicted RBP20.76■□□□□ 0.91
TRA2A-212ENST00000621813 BCL2L12Q9HB09 334 aa20.76■□□□□ 0.91
TRA2A-212ENST00000621813 ANKRD1Q15327 319 aa20.75■□□□□ 0.91
TRA2A-212ENST00000621813 SYCP1Q15431 976 aa20.75■□□□□ 0.91
TRA2A-212ENST00000621813 USPL1Q5W0Q7 1092 aa20.75■□□□□ 0.91
TRA2A-212ENST00000621813 KBTBD3Q8NAB2 608 aa20.75■□□□□ 0.91
TRA2A-212ENST00000621813 ALDH8A1Q9H2A2 487 aaPredicted RBP20.75■□□□□ 0.91
TRA2A-212ENST00000621813 UBAP1LF5GYI3 381 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 PRPF40AO75400 957 aaKnown RBP20.74■□□□□ 0.91
TRA2A-212ENST00000621813 TAF5LO75529 589 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 MBD3O95983 291 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 KRT32Q14532 448 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 CCDC57Q2TAC2 916 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 ZBTB38Q8NAP3 1195 aaPredicted RBP20.74■□□□□ 0.91
TRA2A-212ENST00000621813 PIBF1Q8WXW3 757 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 GIGYF2Q6Y7W6 1299 aaKnown RBP20.74■□□□□ 0.91
TRA2A-212ENST00000621813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRA2A-212ENST00000621813 SMC3Q9UQE7 1217 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 MYH3P11055 1940 aa20.74■□□□□ 0.91
TRA2A-212ENST00000621813 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 CDHR2Q9BYE9 1310 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 DOT1LQ8TEK3 1739 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 SPDYE4A6NLX3 237 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 PSEN1P49768 467 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 MCMDC2Q4G0Z9 681 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 NEUROD6Q96NK8 337 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 RBSNQ9H1K0 784 aa20.73■□□□□ 0.91
TRA2A-212ENST00000621813 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
TRA2A-212ENST00000621813 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
TRA2A-212ENST00000621813 ZNF589Q86UQ0 364 aaPredicted RBP20.72■□□□□ 0.91
TRA2A-212ENST00000621813 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
TRA2A-212ENST00000621813 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
TRA2A-212ENST00000621813 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
TRA2A-212ENST00000621813 ZSCAN23Q3MJ62 389 aa20.72■□□□□ 0.91
TRA2A-212ENST00000621813 NRAPQ86VF7 1730 aa20.72■□□□□ 0.91
TRA2A-212ENST00000621813 CEP126Q9P2H0 1117 aa20.72■□□□□ 0.91
TRA2A-212ENST00000621813 NUP98P52948 1817 aa20.71■□□□□ 0.91
TRA2A-212ENST00000621813 CYP19A1P11511 503 aaPredicted RBP20.71■□□□□ 0.91
TRA2A-212ENST00000621813 CPA1P15085 419 aa20.71■□□□□ 0.91
TRA2A-212ENST00000621813 PAG1Q9NWQ8 432 aa20.71■□□□□ 0.91
TRA2A-212ENST00000621813 THRAP3Q9Y2W1 955 aaKnown RBP20.71■□□□□ 0.91
TRA2A-212ENST00000621813 ATP6V1DQ9Y5K8 247 aa20.71■□□□□ 0.91
TRA2A-212ENST00000621813 CSF1RP07333 972 aa20.7■□□□□ 0.91
TRA2A-212ENST00000621813 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.91
TRA2A-212ENST00000621813 LRRC24Q50LG9 513 aa20.7■□□□□ 0.91
TRA2A-212ENST00000621813 HOMEZQ8IX15 550 aa20.7■□□□□ 0.91
TRA2A-212ENST00000621813 HELLSQ9NRZ9 838 aa20.7■□□□□ 0.91
TRA2A-212ENST00000621813 PHLPP1O60346 1717 aa20.7■□□□□ 0.9
TRA2A-212ENST00000621813 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
TRA2A-212ENST00000621813 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
TRA2A-212ENST00000621813 SAMD1Q6SPF0 538 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms