RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 PHRF1Q9P1Y6 1649 aaKnown RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 C5P01031 1676 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 CHMLP26374 656 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 CASQ1P31415 396 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 GCKRQ14397 625 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 E2F4Q16254 413 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 ESYT1Q9BSJ8 1104 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 RBSNQ9H1K0 784 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 CTNNA3Q9UI47 895 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 SASH1O94885 1247 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 REC8O95072 547 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 JRKLQ9Y4A0 524 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 PCDH11XQ9BZA7 1347 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 PCDH11YQ9BZA8 1340 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 FAM89AQ96GI7 184 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 DDX41Q9UJV9 622 aaKnown RBP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 TBC1D2BQ9UPU7 963 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 SOS2Q07890 1332 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 HOXB7P09629 217 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 TFCP2Q12800 502 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 PIGBQ92521 554 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 FAM227BQ96M60 508 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 METTL22Q9BUU2 404 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 DIAPH3Q9NSV4 1193 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 RIOK3O14730 519 aaKnown RBP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 PPFIA3O75145 1194 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 PRIM1P49642 420 aaKnown RBP6.56□□□□□ -1.36
CPNE4-214ENST00000617767 TIMM10P62072 90 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 POLA2Q14181 598 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 PI4K2BQ8TCG2 481 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 ST7Q9NRC1 585 aa6.56□□□□□ -1.36
CPNE4-214ENST00000617767 USP54Q70EL1 1684 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 KIF1CO43896 1103 aaKnown RBP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 COL9A3Q14050 684 aaPredicted RBP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 MRVI1Q9Y6F6 885 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 COL5A2P05997 1499 aaPredicted RBP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 SCN11AQ9UI33 1791 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 GOLGA6L6A8MZA4 724 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 COL18A1P39060 1754 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 RBM5P52756 815 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 SYT10Q6XYQ8 523 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 DDX46Q7L014 1031 aaKnown RBP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 KRT222Q8N1A0 295 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 GBP4Q96PP9 640 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 FSD1Q9BTV5 496 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 MED4Q9NPJ6 270 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 SNRKQ9NRH2 765 aa6.55□□□□□ -1.36
CPNE4-214ENST00000617767 MORC2Q9Y6X9 1032 aaPredicted RBP6.55□□□□□ -1.36
CPNE4-214ENST00000617767 TSGA10IPQ3SY00 556 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 PRPF40BQ6NWY9 871 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 DNAJC14Q6Y2X3 702 aaPredicted RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 CCDC129Q6ZRS4 1044 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 CNTROBQ8N137 903 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 PUS3Q9BZE2 481 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 RBM28Q9NW13 759 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 DDX49Q9Y6V7 483 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 SALL3Q9BXA9 1300 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 MYO1CO00159 1063 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 ST18O60284 1047 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 ALDH1L1O75891 902 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 PTH1RQ03431 593 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 LRRC24Q50LG9 513 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 RASEFQ8IZ41 740 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 DBNDD2Q9BQY9 259 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 ZNF446Q9NWS9 450 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 LCMT1Q9UIC8 334 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 NCAPD2Q15021 1401 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 RABEP1Q15276 862 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 HLFQ16534 295 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 MNS1Q8NEH6 495 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 SEC62Q99442 399 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 ECHDC1Q9NTX5 307 aa6.54□□□□□ -1.36
CPNE4-214ENST00000617767 AFDNP55196 1824 aaKnown RBP6.54□□□□□ -1.36
CPNE4-214ENST00000617767 EXOC5O00471 708 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 RAB11FIP3O75154 756 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 CYP2C19P33261 490 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 ZKSCAN8Q15776 578 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 RPAINQ86UA6 219 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 PRPF38AQ8NAV1 312 aaKnown RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 C8orf37Q96NL8 207 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 DCCP43146 1447 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 HEG1Q9ULI3 1381 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 PPP1R12AO14974 1030 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 MAFGO15525 162 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 NCBP1Q09161 790 aaKnown RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 DEF6Q9H4E7 631 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 OSBPL3Q9H4L5 887 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 TAF6LQ9Y6J9 622 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 OVOS2A0A0G2JMS6 1433 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 SNAP23O00161 211 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 KCNQ2O43526 872 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms