RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	CNTROB	Q8N137	903 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	GREM2	Q9H772	168 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	BSDC1	Q9NW68	430 aa	Predicted RBP	28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	PSME4	Q14997	1843 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	SCN9A	Q15858	1988 aa		28.5	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	PCNT	O95613	3336 aa		28.49	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	GGA1	Q9UJY5	639 aa		28.49	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	XDH	P47989	1333 aa		28.48	■■■□□ 2.15
ARHGEF1-223	ENST00000617585		E9PSI1	815 aa		28.48	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	MAP1S	Q66K74	1059 aa	Predicted RBP	28.48	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.48	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	ANKIB1	Q9P2G1	1089 aa		28.48	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	RIMBP2	O15034	1052 aa		28.47	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	DPF2	Q92785	391 aa		28.47	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	DBNDD1	Q9H9R9	158 aa		28.47	■■■□□ 2.15
ARHGEF1-223	ENST00000617585		F6X3S4	739 aa		28.46	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	ECE2	O60344	883 aa		28.46	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	UFL1	O94874	794 aa		28.46	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	PGAP2	Q9UHJ9	254 aa		28.46	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	TRPM7	Q96QT4	1865 aa		28.46	■■■□□ 2.15
ARHGEF1-223	ENST00000617585	ATP2B4	P23634	1241 aa		28.45	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	SLFN5	Q08AF3	891 aa		28.45	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	MINPP1	Q9UNW1	487 aa		28.45	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	TMEM88B	A6NKF7	163 aa		28.44	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	PSMD14	O00487	310 aa		28.44	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	GPR101	Q96P66	508 aa	Predicted RBP	28.44	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	BCL2L13	Q9BXK5	485 aa		28.44	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	CNOT7	Q9UIV1	285 aa	Known RBP	28.43	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	ZNF609	O15014	1411 aa		28.43	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	ITGA6	P23229	1130 aa		28.42	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	RPS12	P25398	132 aa	Known RBP	28.42	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	DOK7	Q18PE1	504 aa		28.42	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	TRMT2A	Q8IZ69	625 aa	Known RBP	28.42	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	ZC3H15	Q8WU90	426 aa	Known RBP	28.42	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	CNTNAP1	P78357	1384 aa		28.41	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	ALDH1L1	O75891	902 aa		28.41	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	VIL1	P09327	827 aa	Known RBP	28.41	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	FOXO4	P98177	505 aa		28.41	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	KCNQ5	Q9NR82	932 aa		28.41	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	IGHMBP2	P38935	993 aa	Known RBP	28.4	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	FAM161A	Q3B820	660 aa		28.4	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	MRPL50	Q8N5N7	158 aa	Known RBP	28.4	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.4	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	MED23	Q9ULK4	1368 aa		28.39	■■■□□ 2.14
ARHGEF1-223	ENST00000617585		H7C1D1	291 aa		28.39	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	HIRA	P54198	1017 aa	Predicted RBP	28.39	■■■□□ 2.14
ARHGEF1-223	ENST00000617585	GRM8	O00222	908 aa		28.38	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	MICALL2	Q8IY33	904 aa		28.38	■■■□□ 2.13
ARHGEF1-223	ENST00000617585		A0A1B0GUL6	1792 aa		28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	ZNF646	O15015	1829 aa	Predicted RBP	28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	CCT4	P50991	539 aa	Known RBP	28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	PODN	Q7Z5L7	613 aa		28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	TRPM4	Q8TD43	1214 aa		28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	LEMD3	Q9Y2U8	911 aa		28.37	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	SHTN1	A0MZ66	631 aa		28.36	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	SRCIN1	Q9C0H9	1055 aa		28.36	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	PTPRC	P08575	1304 aa		28.36	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	ANKRD18B	A2A2Z9	1011 aa		28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	WTIP	A6NIX2	430 aa	Predicted RBP	28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	CDCA7L	Q96GN5	454 aa		28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	MPHOSPH8	Q99549	860 aa		28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	ANKRD2	Q9GZV1	360 aa		28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	MKRN1	Q9UHC7	482 aa	Known RBP	28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	POLR2A	P24928	1970 aa	Known RBP	28.35	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	RASSF10	A6NK89	507 aa		28.34	■■■□□ 2.13
ARHGEF1-223	ENST00000617585		G3V3G9	751 aa		28.34	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	DCAF8	Q5TAQ9	597 aa		28.34	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	UTY	O14607	1347 aa		28.34	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	ALDH1L2	Q3SY69	923 aa		28.33	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	AGBL3	Q8NEM8	1001 aa		28.33	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	SSH1	Q8WYL5	1049 aa		28.33	■■■□□ 2.13
ARHGEF1-223	ENST00000617585	IFIT5	Q13325	482 aa	Known RBP	28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	EPHA10	Q5JZY3	1008 aa		28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	CST9	Q5W186	159 aa		28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	SLC4A10	Q6U841	1118 aa		28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	GML	Q99445	158 aa		28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.32	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	FMR1	Q06787	632 aa	Known RBP eCLIP	28.31	■■■□□ 2.12	2e-6	■■■□□ 16.2
ARHGEF1-223	ENST00000617585	RSBN1L	Q6PCB5	846 aa	Predicted RBP	28.31	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	LMBR1L	Q6UX01	489 aa		28.31	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	SAMD7	Q7Z3H4	446 aa		28.31	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	ZNF804B	A4D1E1	1349 aa		28.3	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	TRAF5	O00463	557 aa		28.3	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	CT47B1	P0C2W7	299 aa	Predicted RBP	28.3	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	CDC37L1	Q7L3B6	337 aa		28.3	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	COA1	Q9GZY4	146 aa		28.3	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	USP17L3	A6NCW0	530 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	USP17L4	A6NCW7	530 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	EGFR	P00533	1210 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	ZNF280A	P59817	542 aa	Predicted RBP	28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	CHRND	Q07001	517 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	DEFB115	Q30KQ5	88 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	USP17L1	Q7RTZ2	530 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	KAZALD1	Q96I82	304 aa		28.29	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	VEGFB	P49765	207 aa		28.28	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	TXNRD3	Q86VQ6	643 aa		28.28	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.28	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	IRS2	Q9Y4H2	1338 aa		28.27	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	28.27	■■■□□ 2.12
ARHGEF1-223	ENST00000617585	C15orf52	Q6ZUT6	534 aa	Known RBP	28.27	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms