RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-218ENST00000617172 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 PSMD14O00487 310 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 ECE2O60344 883 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 UFL1O94874 794 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 ATP2B4P23634 1241 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 GCKRQ14397 625 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 XDHP47989 1333 aa12.34□□□□□ -0.43
TARDBP-218ENST00000617172 RTL9Q8NET4 1388 aa12.33□□□□□ -0.44
TARDBP-218ENST00000617172 HSPA1AP0DMV8 641 aaKnown RBP12.33□□□□□ -0.44
TARDBP-218ENST00000617172 HSPA1BP0DMV9 641 aaKnown RBP12.33□□□□□ -0.44
TARDBP-218ENST00000617172 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
TARDBP-218ENST00000617172 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
TARDBP-218ENST00000617172 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-218ENST00000617172 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
TARDBP-218ENST00000617172 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.44
TARDBP-218ENST00000617172 LAMB2P55268 1798 aa12.33□□□□□ -0.44
TARDBP-218ENST00000617172 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
TARDBP-218ENST00000617172 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
TARDBP-218ENST00000617172 VEGFBP49765 207 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 GREM2Q9H772 168 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 ADAMTSL1Q8N6G6 1762 aa12.32□□□□□ -0.44
TARDBP-218ENST00000617172 DUOX1Q9NRD9 1551 aa12.31□□□□□ -0.44
TARDBP-218ENST00000617172 CSF1RP07333 972 aa12.31□□□□□ -0.44
TARDBP-218ENST00000617172 ECE1P42892 770 aa12.31□□□□□ -0.44
TARDBP-218ENST00000617172 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-218ENST00000617172 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-218ENST00000617172 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-218ENST00000617172 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
TARDBP-218ENST00000617172 CASP7P55210 303 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 CST9Q5W186 159 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 AGBL3Q8NEM8 1001 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 ANKRD2Q9GZV1 360 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 KCNQ5Q9NR82 932 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 LEMD3Q9Y2U8 911 aa12.3□□□□□ -0.44
TARDBP-218ENST00000617172 LTBP1Q14766 1721 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 TRAF5O00463 557 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 ITGA6P23229 1130 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 GLIS2Q9BZE0 524 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 TLL2Q9Y6L7 1015 aa12.29□□□□□ -0.44
TARDBP-218ENST00000617172 WDR33Q9C0J8 1336 aaKnown RBP12.29□□□□□ -0.44
TARDBP-218ENST00000617172 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 USP17L3A6NCW0 530 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 USP17L4A6NCW7 530 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
TARDBP-218ENST00000617172 MMP14P50281 582 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-218ENST00000617172 USP17L1Q7RTZ2 530 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
TARDBP-218ENST00000617172 TAF1P21675 1872 aa12.27□□□□□ -0.44
TARDBP-218ENST00000617172 SHTN1A0MZ66 631 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 E9PSI1 815 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 F6X3S4 739 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 ALDH1L1O75891 902 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 COA1Q9GZY4 146 aa12.27□□□□□ -0.45
TARDBP-218ENST00000617172 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-218ENST00000617172 GRM8O00222 908 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 USP17L8P0C7I0 530 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 MAP2K2P36507 400 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 KIF4BQ2VIQ3 1234 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-218ENST00000617172 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 ZNF609O15014 1411 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 COL4A1P02462 1669 aa12.26□□□□□ -0.45
TARDBP-218ENST00000617172 FOXN1O15353 648 aa12.25□□□□□ -0.45
TARDBP-218ENST00000617172 KCNJ4P48050 445 aa12.25□□□□□ -0.45
TARDBP-218ENST00000617172 FOXO4P98177 505 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms