RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 HAUS7Q99871 368 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 RIPOR2Q9Y4F9 1068 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 SPATA31A6Q5VVP1 1343 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 CCDC171Q6TFL3 1326 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 COL15A1P39059 1388 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 IDH1O75874 414 aaKnown RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 PHKA1P46020 1223 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 STK3Q13188 491 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 CREB3L3Q68CJ9 461 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 STK11IPQ8N1F8 1099 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 ARHGEF1Q92888 912 aaKnown RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 LRRC4BQ9NT99 713 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 TRPC5Q9UL62 973 aaPredicted RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 DOT1LQ8TEK3 1739 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 COL22A1Q8NFW1 1626 aaPredicted RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 EIF5BO60841 1220 aaKnown RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 AK2P54819 239 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 HAND2P61296 217 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 TTLL5Q6EMB2 1281 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 CHST3Q7LGC8 479 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 NECAB1Q8N987 351 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 NAP1L2Q9ULW6 460 aaPredicted RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 JAG2Q9Y219 1238 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 RTCBQ9Y3I0 505 aaKnown RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 UBR2Q8IWV8 1755 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 SLC27A2O14975 620 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 LARGE1O95461 756 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 NTSR2O95665 410 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 ZKSCAN1P17029 563 aaPredicted RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 MCM4P33991 863 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 RFC4P35249 363 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 MCAMP43121 646 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 BCAMP50895 628 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 NBPF5PQ86XG9 351 aaPredicted RBP4.13□□□□□ -1.75
LIG4-205ENST00000614526 KBTBD3Q8NAB2 608 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 SETDB2Q96T68 719 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 BCL2L12Q9HB09 334 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 AKAP2Q9Y2D5 859 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 ZNF652Q9Y2D9 606 aa4.13□□□□□ -1.75
LIG4-205ENST00000614526 CIAO1O76071 339 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PDE8BO95263 885 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 IGHMBP2P38935 993 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 NECTIN1Q15223 517 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CCDC152Q4G0S7 254 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 MCMDC2Q4G0Z9 681 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 MAP4K1Q92918 833 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 OSBP2Q969R2 916 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 AK7Q96M32 723 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PLA2G12BQ9BX93 195 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PDRG1Q9NUG6 133 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 MYH14Q7Z406 1995 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 LAMB4A4D0S4 1761 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 M0R2C6 588 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 HIP1O00291 1037 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 APPP05067 770 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 NCLP19338 710 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 FGD1P98174 961 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CCDC102BQ68D86 513 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 MCTP1Q6DN14 999 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 RUFY3Q7L099 469 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CCDC83Q8IWF9 413 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CELF1Q92879 486 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 CYP46A1Q9Y6A2 500 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CDHR2Q9BYE9 1310 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 ZNF609O15014 1411 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 N4BP2Q86UW6 1770 aaPredicted RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 RPS6KA4O75676 772 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 GYG1P46976 350 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 ANAPC15P60006 121 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 CHRNDQ07001 517 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PARP10Q53GL7 1025 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 TRAPPC3LQ5T215 181 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 SLC9C2Q5TAH2 1124 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PUS7LQ9H0K6 701 aaKnown RBP4.12□□□□□ -1.75
LIG4-205ENST00000614526 ABCF2Q9UG63 623 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 PAPPAQ13219 1627 aa4.12□□□□□ -1.75
LIG4-205ENST00000614526 RNF113AO15541 343 aaKnown RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 CYP2E1P05181 493 aaPredicted RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 CYP21A2P08686 494 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 DDIT3P35638 169 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 FOSBP53539 338 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 KRT27Q7Z3Y8 459 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 RAB11FIP4Q86YS3 637 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 GDPD2Q9HCC8 539 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 GPR108Q9NPR9 543 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 PIH1D3Q9NQM4 214 aaKnown RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 TFCP2L1Q9NZI6 479 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 NRAPQ86VF7 1730 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 AK9Q5TCS8 1911 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 MAST3O60307 1309 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 HSPD1P10809 573 aaKnown RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 KLRK1P26718 216 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 GSE1Q14687 1217 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 RAB3GAP1Q15042 981 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 BLOC1S2Q6QNY1 142 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 ANKRD18AQ8IVF6 992 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 VGLL2Q8N8G2 317 aa4.11□□□□□ -1.75
LIG4-205ENST00000614526 GPR101Q96P66 508 aaPredicted RBP4.11□□□□□ -1.75
LIG4-205ENST00000614526 NARFQ9UHQ1 456 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms