RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 GGA1Q9UJY5 639 aa29.01■■■□□ 2.23
FAM228B-208ENST00000613899 H7C1W4 665 aa29■■■□□ 2.23
FAM228B-208ENST00000613899 GCKRQ14397 625 aa29■■■□□ 2.23
FAM228B-208ENST00000613899 ZC3H12CQ9C0D7 883 aaKnown RBP29■■■□□ 2.23
FAM228B-208ENST00000613899 MKRN1Q9UHC7 482 aaKnown RBP29■■■□□ 2.23
FAM228B-208ENST00000613899 CNTNAP1P78357 1384 aa29■■■□□ 2.23
FAM228B-208ENST00000613899 ECE2O60344 883 aa28.99■■■□□ 2.23
FAM228B-208ENST00000613899 XDHP47989 1333 aa28.98■■■□□ 2.23
FAM228B-208ENST00000613899 ZNF521Q96K83 1311 aa28.97■■■□□ 2.23
FAM228B-208ENST00000613899 PCNTO95613 3336 aa28.97■■■□□ 2.23
FAM228B-208ENST00000613899 GPR101Q96P66 508 aaPredicted RBP28.97■■■□□ 2.23
FAM228B-208ENST00000613899 PLA2G12BQ9BX93 195 aa28.97■■■□□ 2.23
FAM228B-208ENST00000613899 GREM2Q9H772 168 aa28.97■■■□□ 2.23
FAM228B-208ENST00000613899 TRPM7Q96QT4 1865 aa28.97■■■□□ 2.23
FAM228B-208ENST00000613899 PSMD14O00487 310 aa28.96■■■□□ 2.23
FAM228B-208ENST00000613899 DOK7Q18PE1 504 aa28.96■■■□□ 2.23
FAM228B-208ENST00000613899 DPF2Q92785 391 aa28.96■■■□□ 2.23
FAM228B-208ENST00000613899 G3V3G9 751 aa28.95■■■□□ 2.22
FAM228B-208ENST00000613899 DCAF8Q5TAQ9 597 aa28.95■■■□□ 2.22
FAM228B-208ENST00000613899 BSDC1Q9NW68 430 aaPredicted RBP28.95■■■□□ 2.22
FAM228B-208ENST00000613899 CNOT7Q9UIV1 285 aaKnown RBP28.95■■■□□ 2.22
FAM228B-208ENST00000613899 SCN9AQ15858 1988 aa28.94■■■□□ 2.22
FAM228B-208ENST00000613899 H7C1D1 291 aa28.94■■■□□ 2.22
FAM228B-208ENST00000613899 RPS12P25398 132 aaKnown RBP28.94■■■□□ 2.22
FAM228B-208ENST00000613899 MICALL2Q8IY33 904 aa28.94■■■□□ 2.22
FAM228B-208ENST00000613899 PSME4Q14997 1843 aa28.93■■■□□ 2.22
FAM228B-208ENST00000613899 ATP2B4P23634 1241 aa28.93■■■□□ 2.22
FAM228B-208ENST00000613899 CASP7P55210 303 aa28.93■■■□□ 2.22
FAM228B-208ENST00000613899 ZC3H15Q8WU90 426 aaKnown RBP28.93■■■□□ 2.22
FAM228B-208ENST00000613899 ZBTB12Q9Y330 459 aaPredicted RBP28.93■■■□□ 2.22
FAM228B-208ENST00000613899 HSPA1AP0DMV8 641 aaKnown RBP28.92■■■□□ 2.22
FAM228B-208ENST00000613899 HSPA1BP0DMV9 641 aaKnown RBP28.92■■■□□ 2.22
FAM228B-208ENST00000613899 IGHMBP2P38935 993 aaKnown RBP28.92■■■□□ 2.22
FAM228B-208ENST00000613899 TRPM4Q8TD43 1214 aa28.91■■■□□ 2.22
FAM228B-208ENST00000613899 PGAP2Q9UHJ9 254 aa28.91■■■□□ 2.22
FAM228B-208ENST00000613899 RASSF10A6NK89 507 aa28.9■■■□□ 2.22
FAM228B-208ENST00000613899 F6X3S4 739 aa28.9■■■□□ 2.22
FAM228B-208ENST00000613899 BEND3Q5T5X7 828 aa28.9■■■□□ 2.22
FAM228B-208ENST00000613899 ABT1Q9ULW3 272 aaKnown RBP28.9■■■□□ 2.22
FAM228B-208ENST00000613899 MINPP1Q9UNW1 487 aa28.9■■■□□ 2.22
FAM228B-208ENST00000613899 ITGA6P23229 1130 aa28.89■■■□□ 2.22
FAM228B-208ENST00000613899 FAM161AQ3B820 660 aa28.89■■■□□ 2.22
FAM228B-208ENST00000613899 IFFO2Q5TF58 517 aa28.89■■■□□ 2.22
FAM228B-208ENST00000613899 MED23Q9ULK4 1368 aa28.88■■■□□ 2.21
FAM228B-208ENST00000613899 ZNF609O15014 1411 aa28.88■■■□□ 2.21
FAM228B-208ENST00000613899 SHTN1A0MZ66 631 aa28.88■■■□□ 2.21
FAM228B-208ENST00000613899 CSF1RP07333 972 aa28.88■■■□□ 2.21
FAM228B-208ENST00000613899 HIRAP54198 1017 aaPredicted RBP28.88■■■□□ 2.21
FAM228B-208ENST00000613899 KCNQ5Q9NR82 932 aa28.88■■■□□ 2.21
FAM228B-208ENST00000613899 TRAF5O00463 557 aa28.87■■■□□ 2.21
FAM228B-208ENST00000613899 VIL1P09327 827 aaKnown RBP28.87■■■□□ 2.21
FAM228B-208ENST00000613899 VEGFBP49765 207 aa28.87■■■□□ 2.21
FAM228B-208ENST00000613899 DEFB115Q30KQ5 88 aa28.87■■■□□ 2.21
FAM228B-208ENST00000613899 E9PSI1 815 aa28.86■■■□□ 2.21
FAM228B-208ENST00000613899 FMR1Q06787 632 aaKnown RBP eCLIP28.86■■■□□ 2.21
FAM228B-208ENST00000613899 MPHOSPH8Q99549 860 aa28.86■■■□□ 2.21
FAM228B-208ENST00000613899 CCT4P50991 539 aaKnown RBP28.85■■■□□ 2.21
FAM228B-208ENST00000613899 PODNQ7Z5L7 613 aa28.85■■■□□ 2.21
FAM228B-208ENST00000613899 GLIS2Q9BZE0 524 aaPredicted RBP28.85■■■□□ 2.21
FAM228B-208ENST00000613899 CDC37L1Q7L3B6 337 aa28.84■■■□□ 2.21
FAM228B-208ENST00000613899 SAMD7Q7Z3H4 446 aa28.84■■■□□ 2.21
FAM228B-208ENST00000613899 ANKRD18BA2A2Z9 1011 aa28.83■■■□□ 2.21
FAM228B-208ENST00000613899 GRM8O00222 908 aa28.83■■■□□ 2.21
FAM228B-208ENST00000613899 TBC1D10BQ4KMP7 808 aaPredicted RBP28.83■■■□□ 2.21
FAM228B-208ENST00000613899 ANKRD2Q9GZV1 360 aa28.83■■■□□ 2.21
FAM228B-208ENST00000613899 LEMD3Q9Y2U8 911 aa28.83■■■□□ 2.21
FAM228B-208ENST00000613899 ALDH1L1O75891 902 aa28.82■■■□□ 2.2
FAM228B-208ENST00000613899 CST9Q5W186 159 aa28.82■■■□□ 2.2
FAM228B-208ENST00000613899 RSBN1LQ6PCB5 846 aaPredicted RBP28.82■■■□□ 2.2
FAM228B-208ENST00000613899 AGBL3Q8NEM8 1001 aa28.82■■■□□ 2.2
FAM228B-208ENST00000613899 SLC4A10Q6U841 1118 aa28.81■■■□□ 2.2
FAM228B-208ENST00000613899 SRCIN1Q9C0H9 1055 aa28.81■■■□□ 2.2
FAM228B-208ENST00000613899 TLL2Q9Y6L7 1015 aa28.81■■■□□ 2.2
FAM228B-208ENST00000613899 CELF2O95319 508 aaKnown RBP28.8■■■□□ 2.2
FAM228B-208ENST00000613899 FOXO4P98177 505 aa28.8■■■□□ 2.2
FAM228B-208ENST00000613899 IFIT5Q13325 482 aaKnown RBP28.8■■■□□ 2.2
FAM228B-208ENST00000613899 KIF4BQ2VIQ3 1234 aa28.8■■■□□ 2.2
FAM228B-208ENST00000613899 C9orf78Q9NZ63 289 aaPredicted RBP28.8■■■□□ 2.2
FAM228B-208ENST00000613899 CHMP3Q9Y3E7 222 aa28.8■■■□□ 2.2
FAM228B-208ENST00000613899 THSD7BQ9C0I4 1608 aa28.8■■■□□ 2.2
FAM228B-208ENST00000613899 WDR33Q9C0J8 1336 aaKnown RBP28.79■■■□□ 2.2
FAM228B-208ENST00000613899 USP17L3A6NCW0 530 aa28.79■■■□□ 2.2
FAM228B-208ENST00000613899 USP17L4A6NCW7 530 aa28.79■■■□□ 2.2
FAM228B-208ENST00000613899 EGFRP00533 1210 aa28.79■■■□□ 2.2
FAM228B-208ENST00000613899 USP17L1Q7RTZ2 530 aa28.79■■■□□ 2.2
FAM228B-208ENST00000613899 A0A1B0GUL6 1792 aa28.79■■■□□ 2.2
FAM228B-208ENST00000613899 ZNF804BA4D1E1 1349 aa28.78■■■□□ 2.2
FAM228B-208ENST00000613899 WTIPA6NIX2 430 aaPredicted RBP28.78■■■□□ 2.2
FAM228B-208ENST00000613899 CCER2I3L3R5 266 aa28.78■■■□□ 2.2
FAM228B-208ENST00000613899 ECE1P42892 770 aa28.78■■■□□ 2.2
FAM228B-208ENST00000613899 SLFN5Q08AF3 891 aa28.78■■■□□ 2.2
FAM228B-208ENST00000613899 RBM26Q5T8P6 1007 aaKnown RBP28.78■■■□□ 2.2
FAM228B-208ENST00000613899 COL13A1Q5TAT6 717 aaPredicted RBP28.78■■■□□ 2.2
FAM228B-208ENST00000613899 PAXIP1Q6ZW49 1069 aaPredicted RBP28.78■■■□□ 2.2
FAM228B-208ENST00000613899 COA1Q9GZY4 146 aa28.78■■■□□ 2.2
FAM228B-208ENST00000613899 ZNF280AP59817 542 aaPredicted RBP28.77■■■□□ 2.2
FAM228B-208ENST00000613899 CHRNDQ07001 517 aa28.77■■■□□ 2.2
FAM228B-208ENST00000613899 DCPSQ96C86 337 aaKnown RBP28.77■■■□□ 2.2
FAM228B-208ENST00000613899 ZNF646O15015 1829 aaPredicted RBP28.77■■■□□ 2.2
FAM228B-208ENST00000613899 PTPRCP08575 1304 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms