RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 LGR6Q9HBX8 967 aa14.4□□□□□ -0.1
TNFAIP3-206ENST00000612899 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
TNFAIP3-206ENST00000612899 MARCKSP29966 332 aaPredicted RBP14.4□□□□□ -0.1
TNFAIP3-206ENST00000612899 TNIP1Q15025 636 aa14.4□□□□□ -0.1
TNFAIP3-206ENST00000612899 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
TNFAIP3-206ENST00000612899 MTIF2P46199 727 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 TIMM10P62072 90 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 RTN1Q16799 776 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 HSP90AA4PQ58FG1 418 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 IQCEQ6IPM2 695 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 TDRD12Q587J7 1177 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 CCDC148Q8NFR7 591 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 KLHDC4Q8TBB5 520 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 ZNF790Q6PG37 636 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 TMCO3Q6UWJ1 677 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 CUL5Q93034 780 aa14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 ZNF830Q96NB3 372 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-206ENST00000612899 CAVIN2O95810 425 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 GSDMDP57764 484 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 FEZ1Q99689 392 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 UTP14AQ9BVJ6 771 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 NBPF7P0C2Y1 421 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 TMTC2Q8N394 836 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 TRPM2O94759 1503 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 F8W031 263 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 UVSSAQ2YD98 709 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 MIGA1Q8NAN2 632 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 C8orf37Q96NL8 207 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 CNNM2Q9H8M5 875 aa14.38□□□□□ -0.11
TNFAIP3-206ENST00000612899 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 NEMFO60524 1076 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 KCNG4Q8TDN1 519 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 MRPS27Q92552 414 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 KIF20AO95235 890 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 HLA-DOAP06340 250 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 AFMP43652 599 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 PLCD3Q8N3E9 789 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 UBAP1LF5GYI3 381 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 USP8P40818 1118 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 PRIM1P49642 420 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 WDR78Q5VTH9 848 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 TAX1BP1Q86VP1 789 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 DYNC1I1O14576 645 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 YEATS4O95619 227 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 TSPY3P0CV98 308 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 TSPY8P0CW00 308 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP3-206ENST00000612899 FGFR1OPO95684 399 aaKnown RBP14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 EDC4Q6P2E9 1401 aaKnown RBP14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 KANK3Q6NY19 840 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 FAM200AQ8TCP9 573 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 PTPRTO14522 1441 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 CASQ1P31415 396 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 DNAJC25Q9H1X3 360 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 AMPD3Q01432 767 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 DHX32Q7L7V1 743 aaKnown RBP14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
TNFAIP3-206ENST00000612899 SBNO1A3KN83 1393 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 N4BP3O15049 544 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 RXRAP19793 462 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CHMP4BP1P59074 171 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CCDC171Q6TFL3 1326 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 TOM1O60784 492 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CRACR2AQ9BSW2 395 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 ST5P78524 1137 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 TIGD1Q96MW7 591 aa14.35□□□□□ -0.11
TNFAIP3-206ENST00000612899 SYT1P21579 422 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 DBNDD2Q9BQY9 259 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 USP19O94966 1318 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 UBASH3AP57075 661 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 INTS4Q96HW7 963 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 JAG2Q9Y219 1238 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 SPTLC2O15270 562 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 GSTO1P78417 241 aa14.34□□□□□ -0.11
TNFAIP3-206ENST00000612899 USO1O60763 962 aaKnown RBP14.33□□□□□ -0.11
TNFAIP3-206ENST00000612899 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms