RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
HDDC2-203ENST00000608284 KIF23Q02241 960 aaPredicted RBP20.51■□□□□ 0.87
HDDC2-203ENST00000608284 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
HDDC2-203ENST00000608284 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
HDDC2-203ENST00000608284 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
HDDC2-203ENST00000608284 REM2Q8IYK8 340 aaPredicted RBP20.51■□□□□ 0.87
HDDC2-203ENST00000608284 TBC1D16Q8TBP0 767 aa20.51■□□□□ 0.87
HDDC2-203ENST00000608284 GGA1Q9UJY5 639 aa20.5■□□□□ 0.87
HDDC2-203ENST00000608284 ADM5C9JUS6 153 aa20.49■□□□□ 0.87
HDDC2-203ENST00000608284 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
HDDC2-203ENST00000608284 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
HDDC2-203ENST00000608284 ZIC5Q96T25 663 aa20.49■□□□□ 0.87
HDDC2-203ENST00000608284 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
HDDC2-203ENST00000608284 ANKRD36CQ5JPF3 1778 aa20.49■□□□□ 0.87
HDDC2-203ENST00000608284 TRPA1O75762 1119 aa20.48■□□□□ 0.87
HDDC2-203ENST00000608284 UFL1O94874 794 aa20.48■□□□□ 0.87
HDDC2-203ENST00000608284 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
HDDC2-203ENST00000608284 DLK2Q6UY11 383 aa20.48■□□□□ 0.87
HDDC2-203ENST00000608284 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
HDDC2-203ENST00000608284 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
HDDC2-203ENST00000608284 FAM155AB1AL88 458 aaPredicted RBP20.47■□□□□ 0.87
HDDC2-203ENST00000608284 RNF186Q9NXI6 227 aa20.47■□□□□ 0.87
HDDC2-203ENST00000608284 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
HDDC2-203ENST00000608284 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
HDDC2-203ENST00000608284 AGBL3Q8NEM8 1001 aa20.46■□□□□ 0.87
HDDC2-203ENST00000608284 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
HDDC2-203ENST00000608284 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
HDDC2-203ENST00000608284 EGFRP00533 1210 aa20.45■□□□□ 0.86
HDDC2-203ENST00000608284 FKBP1BP68106 108 aa20.45■□□□□ 0.86
HDDC2-203ENST00000608284 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
HDDC2-203ENST00000608284 SCARF1Q14162 830 aa20.45■□□□□ 0.86
HDDC2-203ENST00000608284 RSBN1LQ6PCB5 846 aaPredicted RBP20.45■□□□□ 0.86
HDDC2-203ENST00000608284 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
HDDC2-203ENST00000608284 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
HDDC2-203ENST00000608284 CCDC191Q8NCU4 936 aa20.44■□□□□ 0.86
HDDC2-203ENST00000608284 CASP8AP2Q9UKL3 1982 aa20.44■□□□□ 0.86
HDDC2-203ENST00000608284 RTL9Q8NET4 1388 aa20.44■□□□□ 0.86
HDDC2-203ENST00000608284 PDE8AO60658 829 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 SLC10A3P09131 477 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 USP17L8P0C7I0 530 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 ANGEL2Q5VTE6 544 aaKnown RBP20.43■□□□□ 0.86
HDDC2-203ENST00000608284 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 CSRNP1Q96S65 589 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 MYD88Q99836 296 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 SEC31BQ9NQW1 1179 aa20.43■□□□□ 0.86
HDDC2-203ENST00000608284 LAMB2P55268 1798 aa20.42■□□□□ 0.86
HDDC2-203ENST00000608284 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
HDDC2-203ENST00000608284 ZNF280AP59817 542 aaPredicted RBP20.42■□□□□ 0.86
HDDC2-203ENST00000608284 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
HDDC2-203ENST00000608284 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
HDDC2-203ENST00000608284 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 PCCAP05165 728 aaPredicted RBP20.41■□□□□ 0.86
HDDC2-203ENST00000608284 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 PODNQ7Z5L7 613 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 CTU1Q7Z7A3 348 aaKnown RBP20.41■□□□□ 0.86
HDDC2-203ENST00000608284 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 MYOZ2Q9NPC6 264 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 XDHP47989 1333 aa20.41■□□□□ 0.86
HDDC2-203ENST00000608284 GNAI1P63096 354 aa20.4■□□□□ 0.86
HDDC2-203ENST00000608284 TTLL12Q14166 644 aaPredicted RBP20.4■□□□□ 0.86
HDDC2-203ENST00000608284 CDC5LQ99459 802 aaKnown RBP20.4■□□□□ 0.86
HDDC2-203ENST00000608284 PCDH10Q9P2E7 1040 aa20.4■□□□□ 0.86
HDDC2-203ENST00000608284 HDAC9Q9UKV0 1011 aa20.4■□□□□ 0.86
HDDC2-203ENST00000608284 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
HDDC2-203ENST00000608284 NF2P35240 595 aa20.39■□□□□ 0.85
HDDC2-203ENST00000608284 CCDC85AQ96PX6 553 aaPredicted RBP20.39■□□□□ 0.85
HDDC2-203ENST00000608284 PITPNM2Q9BZ72 1349 aa20.38■□□□□ 0.85
HDDC2-203ENST00000608284 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
HDDC2-203ENST00000608284 SOX10P56693 466 aa20.38■□□□□ 0.85
HDDC2-203ENST00000608284 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
HDDC2-203ENST00000608284 PKN2Q16513 984 aaKnown RBP20.38■□□□□ 0.85
HDDC2-203ENST00000608284 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
HDDC2-203ENST00000608284 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
HDDC2-203ENST00000608284 LRRC37AA6NMS7 1700 aa20.38■□□□□ 0.85
HDDC2-203ENST00000608284 TAF1P21675 1872 aa20.37■□□□□ 0.85
HDDC2-203ENST00000608284 ASTN2O75129 1339 aaPredicted RBP20.37■□□□□ 0.85
HDDC2-203ENST00000608284 CCDC30Q5VVM6 783 aa20.37■□□□□ 0.85
HDDC2-203ENST00000608284 RASAL3Q86YV0 1011 aa20.37■□□□□ 0.85
HDDC2-203ENST00000608284 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
HDDC2-203ENST00000608284 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
HDDC2-203ENST00000608284 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
HDDC2-203ENST00000608284 MMP14P50281 582 aa20.35■□□□□ 0.85
HDDC2-203ENST00000608284 JARID2Q92833 1246 aaPredicted RBP20.35■□□□□ 0.85
HDDC2-203ENST00000608284 DDX60Q8IY21 1712 aaKnown RBP20.34■□□□□ 0.85
HDDC2-203ENST00000608284 UBE2Q2LH0YL09 131 aa20.34■□□□□ 0.85
HDDC2-203ENST00000608284 MYO3BQ8WXR4 1341 aa20.33■□□□□ 0.85
HDDC2-203ENST00000608284 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
HDDC2-203ENST00000608284 CTSWP56202 376 aa20.33■□□□□ 0.85
HDDC2-203ENST00000608284 GMLQ99445 158 aa20.33■□□□□ 0.85
HDDC2-203ENST00000608284 BSDC1Q9NW68 430 aaPredicted RBP20.33■□□□□ 0.85
HDDC2-203ENST00000608284 SREBF2Q12772 1141 aa20.32■□□□□ 0.84
HDDC2-203ENST00000608284 ARMC9Q7Z3E5 817 aa20.32■□□□□ 0.84
HDDC2-203ENST00000608284 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
HDDC2-203ENST00000608284 ZNF609O15014 1411 aa20.32■□□□□ 0.84
HDDC2-203ENST00000608284 APAF1O14727 1248 aa20.31■□□□□ 0.84
HDDC2-203ENST00000608284 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
HDDC2-203ENST00000608284 STRIP1Q5VSL9 837 aa20.31■□□□□ 0.84
HDDC2-203ENST00000608284 STK31Q9BXU1 1019 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms