RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 TBCAO75347 108 aaKnown RBP12.69□□□□□ -0.38
SHANK2-219ENST00000606715 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-219ENST00000606715 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 IDEP14735 1019 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 ERMNQ8TAM6 284 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 NCOA7Q8NI08 942 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
SHANK2-219ENST00000606715 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 PRC1O43663 620 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 NOP2P46087 812 aaKnown RBP12.68□□□□□ -0.38
SHANK2-219ENST00000606715 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
SHANK2-219ENST00000606715 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 KRT23Q9C075 422 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
SHANK2-219ENST00000606715 STX6O43752 255 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 STAMBPO95630 424 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 PHACTR2O75167 634 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 GNAT2P19087 354 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
SHANK2-219ENST00000606715 NSFL1CQ9UNZ2 370 aaKnown RBP12.67□□□□□ -0.38
SHANK2-219ENST00000606715 LTKP29376 864 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 EIF6P56537 245 aaKnown RBP12.67□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 ARHGAP29Q52LW3 1261 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 ANXA1P04083 346 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 GNPATO15228 680 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 ERLIN1O75477 346 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 CFAP100Q494V2 611 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHANK2-219ENST00000606715 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 TTC41PQ6P2S7 1318 aa12.67□□□□□ -0.38
SHANK2-219ENST00000606715 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-219ENST00000606715 CYP7A1P22680 504 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
SHANK2-219ENST00000606715 BRDTQ58F21 947 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-219ENST00000606715 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 ERVK-7P63135 1459 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 TNNT1P13805 278 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 GNAQP50148 359 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 USP37Q86T82 979 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 KIF4AO95239 1232 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 IL13P35225 146 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 FAM193AP78312 1265 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 C20orf194Q5TEA3 1177 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 LRRC27Q9C0I9 530 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 VAMP4O75379 141 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 LMAN1P49257 510 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
SHANK2-219ENST00000606715 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 LPXNO60711 386 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
SHANK2-219ENST00000606715 MEIS3Q99687 375 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
SHANK2-219ENST00000606715 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-219ENST00000606715 GUCY1B3Q02153 619 aa12.65□□□□□ -0.39
SHANK2-219ENST00000606715 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.39
SHANK2-219ENST00000606715 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.39
SHANK2-219ENST00000606715 ESR2Q92731 530 aa12.65□□□□□ -0.39
SHANK2-219ENST00000606715 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 PER1O15534 1290 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-219ENST00000606715 MCM5P33992 734 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 NUCB1Q02818 461 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 TSNARE1Q96NA8 513 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 TMOD4Q9NZQ9 345 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 ACTN2P35609 894 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-219ENST00000606715 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 INSRP06213 1382 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
SHANK2-219ENST00000606715 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
SHANK2-219ENST00000606715 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 UBA7P41226 1012 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
SHANK2-219ENST00000606715 APBA3O96018 575 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
SHANK2-219ENST00000606715 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
SHANK2-219ENST00000606715 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
SHANK2-219ENST00000606715 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 335 ms