RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	ZSCAN32	Q9NX65	697 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TRMT1	Q9NXH9	659 aa	Known RBP	4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TPX2	Q9ULW0	747 aa	Known RBP	4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PTCH1	Q13635	1447 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	RIOK3	O14730	519 aa	Known RBP	4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZSCAN12	O43309	604 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KRT13	P13646	458 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CC2D2B	Q6DHV5	1058 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PHLDB2	Q86SQ0	1253 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	AFAP1	Q8N556	730 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TESK2	Q96S53	571 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SIN3A	Q96ST3	1273 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NSD2	O96028	1365 aa		4.66	□□□□□ -1.66
KCNMA1-223	ENST00000604624	BUB1B	O60566	1050 aa	Predicted RBP	4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NUDCD3	Q8IVD9	361 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CNTROB	Q8N137	903 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	RMDN2	Q96LZ7	410 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624		A0A1B0GUA9	196 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SMTNL1	A8MU46	457 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FGFR1OP	O95684	399 aa	Known RBP	4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CCDC121	Q6ZUS5	278 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FCHSD2	O94868	740 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CDR2	Q01850	454 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	WHAMMP3	Q1A5X7	153 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CPLX4	Q7Z7G2	160 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CCDC114	Q96M63	670 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NEXMIF	Q5QGS0	1516 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DIP2A	Q14689	1571 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KAT6A	Q92794	2004 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PFDN1	O60925	122 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PDCD2	Q16342	344 aa	Predicted RBP	4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FMNL3	Q8IVF7	1028 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CLSTN2	Q9H4D0	955 aa		4.65	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CCDC125	Q86Z20	511 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SELENOS	Q9BQE4	189 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MROH2A	A6NES4	1674 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	A2ML1	A8K2U0	1454 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	VGLL3	A8MV65	326 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ANKRD35	Q8N283	1001 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPATA32	Q96LK8	384 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	EXOC1	Q9NV70	894 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MYH9	P35579	1960 aa	Known RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GOLGA8A	A7E2F4	631 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GOLGA8B	A8MQT2	603 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TNIP1	Q15025	636 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CTAGE1	Q96RT6	745 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SERPINI2	O75830	405 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CACNA2D3	Q8IZS8	1091 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ARHGEF2	Q92974	986 aa	Known RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TERF2IP	Q9NYB0	399 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NUB1	Q9Y5A7	615 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SETD1B	Q9UPS6	1966 aa	Known RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CAPN2	P17655	700 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PHEX	P78562	749 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CDC42BPG	Q6DT37	1551 aa		4.65	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PKD2	Q13563	968 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RIC3	Q7Z5B4	369 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SEC62	Q99442	399 aa	Known RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GIPC1	O14908	333 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IVL	P07476	585 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ERCC6L	Q2NKX8	1250 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CPLX3	Q8WVH0	158 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	STMN4	Q9H169	189 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SAMM50	Q9Y512	469 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	STK10	O94804	968 aa	Known RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FSCB	Q5H9T9	825 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZKSCAN2	Q63HK3	967 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CETN1	Q12798	172 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	UAP1	Q16222	522 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DDX12P	Q92771	950 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TTC14	Q96N46	770 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIF6	Q6ZMV9	814 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SEC63	Q9UGP8	760 aa	Known RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PARD3	Q8TEW0	1356 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PER1	O15534	1290 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GFAP	P14136	432 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	GJC1	P36383	396 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PLCB3	Q01970	1234 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC25	Q86WR0	208 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NUP62CL	Q9H1M0	184 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPINK5	Q9NQ38	1064 aa	Predicted RBP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AFG3L2	Q9Y4W6	797 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SYCE3	A1L190	88 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TSC22D1	Q15714	1073 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC57	Q2TAC2	916 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TRIM68	Q6AZZ1	485 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZNF365	Q70YC5	407 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PALMD	Q9NP74	551 aa		4.64	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC7	Q96M83	1385 aa		4.64	□□□□□ -1.67

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