RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 RIPOR2Q9Y4F9 1068 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
IRF3-229ENST00000601373 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 QSER1Q2KHR3 1735 aa16.71■□□□□ 0.27
IRF3-229ENST00000601373 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
IRF3-229ENST00000601373 GYS1P13807 737 aa16.71■□□□□ 0.27
IRF3-229ENST00000601373 NFIXQ14938 502 aa16.71■□□□□ 0.27
IRF3-229ENST00000601373 RILPL2Q969X0 211 aa16.71■□□□□ 0.27
IRF3-229ENST00000601373 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
IRF3-229ENST00000601373 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
IRF3-229ENST00000601373 ATP5JP18859 108 aa16.7■□□□□ 0.26
IRF3-229ENST00000601373 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
IRF3-229ENST00000601373 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
IRF3-229ENST00000601373 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
IRF3-229ENST00000601373 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
IRF3-229ENST00000601373 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
IRF3-229ENST00000601373 NPHP1O15259 732 aa16.69■□□□□ 0.26
IRF3-229ENST00000601373 MFAP1P55081 439 aaKnown RBP16.69■□□□□ 0.26
IRF3-229ENST00000601373 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
IRF3-229ENST00000601373 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
IRF3-229ENST00000601373 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
IRF3-229ENST00000601373 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 A0A1B0GUL7 405 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 TM4SF1P30408 202 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
IRF3-229ENST00000601373 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
IRF3-229ENST00000601373 TIMM10P62072 90 aa16.67■□□□□ 0.26
IRF3-229ENST00000601373 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
IRF3-229ENST00000601373 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
IRF3-229ENST00000601373 ZNF609O15014 1411 aa16.67■□□□□ 0.26
IRF3-229ENST00000601373 RIC1Q4ADV7 1423 aa16.67■□□□□ 0.26
IRF3-229ENST00000601373 ABCC12Q96J65 1359 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 HIP1O00291 1037 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 REC8O95072 547 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 PDE8BO95263 885 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 CHMLP26374 656 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 COL23A1Q86Y22 540 aaPredicted RBP16.66■□□□□ 0.26
IRF3-229ENST00000601373 ANKRD18AQ8IVF6 992 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
IRF3-229ENST00000601373 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 BOLA2Q9H3K6 86 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
IRF3-229ENST00000601373 GOLGB1Q14789 3259 aaKnown RBP16.65■□□□□ 0.26
IRF3-229ENST00000601373 SERPINB2P05120 415 aa16.65■□□□□ 0.26
IRF3-229ENST00000601373 ST5P78524 1137 aa16.65■□□□□ 0.26
IRF3-229ENST00000601373 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
IRF3-229ENST00000601373 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
IRF3-229ENST00000601373 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
IRF3-229ENST00000601373 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
IRF3-229ENST00000601373 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
IRF3-229ENST00000601373 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
IRF3-229ENST00000601373 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
IRF3-229ENST00000601373 HAUS7Q99871 368 aa16.64■□□□□ 0.25
IRF3-229ENST00000601373 BSDC1Q9NW68 430 aaPredicted RBP16.64■□□□□ 0.25
IRF3-229ENST00000601373 AK9Q5TCS8 1911 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 RBM25P49756 843 aaKnown RBP16.63■□□□□ 0.25
IRF3-229ENST00000601373 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
IRF3-229ENST00000601373 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 LPIN2Q92539 896 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 ESYT1Q9BSJ8 1104 aa16.63■□□□□ 0.25
IRF3-229ENST00000601373 SLC5A1P13866 664 aa16.62■□□□□ 0.25
IRF3-229ENST00000601373 RPS8P62241 208 aaKnown RBP16.62■□□□□ 0.25
IRF3-229ENST00000601373 TTC39AQ5SRH9 613 aa16.62■□□□□ 0.25
IRF3-229ENST00000601373 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
IRF3-229ENST00000601373 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
IRF3-229ENST00000601373 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
IRF3-229ENST00000601373 POLRMTO00411 1230 aaKnown RBP16.61■□□□□ 0.25
IRF3-229ENST00000601373 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
IRF3-229ENST00000601373 FGFR2P21802 821 aa16.61■□□□□ 0.25
IRF3-229ENST00000601373 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
IRF3-229ENST00000601373 CD2APQ9Y5K6 639 aa16.61■□□□□ 0.25
IRF3-229ENST00000601373 RFX7Q2KHR2 1363 aa16.61■□□□□ 0.25
IRF3-229ENST00000601373 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
IRF3-229ENST00000601373 CHRNDQ07001 517 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 DDR1Q08345 913 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
IRF3-229ENST00000601373 ADORA1P30542 326 aa16.59■□□□□ 0.25
IRF3-229ENST00000601373 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
IRF3-229ENST00000601373 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
IRF3-229ENST00000601373 SGSM2O43147 1006 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 LRRFIP1Q32MZ4 808 aaKnown RBP16.58■□□□□ 0.24
IRF3-229ENST00000601373 CRY2Q49AN0 593 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
IRF3-229ENST00000601373 HELBQ8NG08 1087 aaPredicted RBP16.58■□□□□ 0.24
IRF3-229ENST00000601373 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
IRF3-229ENST00000601373 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms