RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	MRPS27	Q92552	414 aa	Known RBP	13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	DSCC1	Q9BVC3	393 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	POLR3E	Q9NVU0	708 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	HOOK1	Q9UJC3	728 aa	Known RBP	13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	HEG1	Q9ULI3	1381 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	SH3TC1	Q8TE82	1336 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ADAMTS13	Q76LX8	1427 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	LARGE1	O95461	756 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	PTH1R	Q03431	593 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TOB2	Q14106	344 aa	Predicted RBP	13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ADCK5	Q3MIX3	580 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TSHZ3	Q63HK5	1081 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	FBXO38	Q6PIJ6	1188 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	LARP1	Q6PKG0	1096 aa	Known RBP	13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TXNDC2	Q86VQ3	553 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	EXOC4	Q96A65	974 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	PGBD1	Q96JS3	809 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IL25	Q9H293	177 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	GPR108	Q9NPR9	543 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	HELLS	Q9NRZ9	838 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TNR	Q92752	1358 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	SPEF2	Q9C093	1822 aa		13.66	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ARHGAP6	O43182	974 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TAF5L	O75529	589 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	FBLN1	P23142	703 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	LRMP	Q12912	555 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	BRD3	Q15059	726 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NOM1	Q5C9Z4	860 aa	Known RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	AKAP4	Q5JQC9	854 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	DHX32	Q7L7V1	743 aa	Known RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CKAP2L	Q8IYA6	745 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IL17RE	Q8NFR9	667 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TSC1	Q92574	1164 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	UTP14A	Q9BVJ6	771 aa	Known RBP	13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	UBXN6	Q9BZV1	441 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	GBP3	Q9H0R5	595 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	KIAA1468	Q9P260	1216 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ZRANB1	Q9UGI0	708 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TBX22	Q9Y458	520 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ROBO2	Q9HCK4	1378 aa		13.65	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ABCC6	O95255	1503 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FAM237A	A0A1B0GTK4	181 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NLRP12	P59046	1061 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NMI	Q13287	307 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CAMK4	Q16566	473 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	AACS	Q86V21	672 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	DHX40	Q8IX18	779 aa	Known RBP	13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	GOLGA6L1	Q8N7Z2	621 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MNS1	Q8NEH6	495 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	RABGGTA	Q92696	567 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	BRF1	Q92994	677 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CCDC34	Q96HJ3	373 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FSD1	Q9BTV5	496 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FAM107B	Q9H098	131 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ACBD3	Q9H3P7	528 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	COPRS	Q9NQ92	184 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	DACH1	Q9UI36	760 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	SLIT3	O75094	1523 aa		13.64	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ADCY9	O60503	1353 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PALLD	Q8WX93	1383 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ABCC12	Q96J65	1359 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	GRM8	O00222	908 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	RPS6KA5	O75582	802 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CCDC144B	Q3MJ40	725 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CCDC144CP	Q8IYA2	1237 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PPP1R13B	Q96KQ4	1090 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ESF1	Q9H501	851 aa	Known RBP	13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	UBR1	Q8IWV7	1749 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	SALL1	Q9NSC2	1324 aa		13.63	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MYH15	Q9Y2K3	1946 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PI4KAP2	A4QPH2	592 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	CCDC151	A5D8V7	595 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	EIF3J	O75822	258 aa	Known RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PNMA6A	P0CW24	399 aa	Predicted RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MCM3	P25205	808 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	HOXC9	P31274	260 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	ADD1	P35611	737 aa	Known RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NEXN	Q0ZGT2	675 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	MCMDC2	Q4G0Z9	681 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	PI4KAP1	Q8N8J0	262 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	KCNH5	Q8NCM2	988 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	GOLGA5	Q8TBA6	731 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	IPO4	Q8TEX9	1081 aa	Known RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	SDF4	Q9BRK5	362 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NAA15	Q9BXJ9	866 aa	Known RBP	13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TMX1	Q9H3N1	280 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	TMEM51	Q9NW97	253 aa		13.62	□□□□□ -0.23
U2AF1L4-221	ENST00000601236	NRBP1	Q9UHY1	535 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms