RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 SLC4A10Q6U841 1118 aa23.61■■□□□ 1.37
SNRPA-205ENST00000598923 UBE3BQ7Z3V4 1068 aa23.61■■□□□ 1.37
SNRPA-205ENST00000598923 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
SNRPA-205ENST00000598923 POLLQ9UGP5 575 aa23.61■■□□□ 1.37
SNRPA-205ENST00000598923 MYH3P11055 1940 aa23.61■■□□□ 1.37
SNRPA-205ENST00000598923 H7C1W4 665 aa23.6■■□□□ 1.37
SNRPA-205ENST00000598923 GPSM2P81274 684 aa23.6■■□□□ 1.37
SNRPA-205ENST00000598923 FMR1Q06787 632 aaKnown RBP eCLIP23.6■■□□□ 1.37
SNRPA-205ENST00000598923 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
SNRPA-205ENST00000598923 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
SNRPA-205ENST00000598923 SEC31BQ9NQW1 1179 aa23.6■■□□□ 1.37
SNRPA-205ENST00000598923 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
SNRPA-205ENST00000598923 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
SNRPA-205ENST00000598923 DEFB115Q30KQ5 88 aa23.58■■□□□ 1.37
SNRPA-205ENST00000598923 BEND3Q5T5X7 828 aa23.58■■□□□ 1.37
SNRPA-205ENST00000598923 SCN9AQ15858 1988 aa23.58■■□□□ 1.36
SNRPA-205ENST00000598923 THSD7BQ9C0I4 1608 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 C6orf229H3BNL8 230 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 TRAF5O00463 557 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 HIRAP54198 1017 aaPredicted RBP23.56■■□□□ 1.36
SNRPA-205ENST00000598923 CTSWP56202 376 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 CST9Q5W186 159 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 TBC1D16Q8TBP0 767 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 DBNDD1Q9H9R9 158 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 SMC4Q9NTJ3 1288 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 PODXL2Q9NZ53 605 aa23.56■■□□□ 1.36
SNRPA-205ENST00000598923 PSME4Q14997 1843 aa23.55■■□□□ 1.36
SNRPA-205ENST00000598923 RIMBP2O15034 1052 aa23.55■■□□□ 1.36
SNRPA-205ENST00000598923 TNS4Q8IZW8 715 aa23.55■■□□□ 1.36
SNRPA-205ENST00000598923 EYA3Q99504 573 aa23.55■■□□□ 1.36
SNRPA-205ENST00000598923 CNOT7Q9UIV1 285 aaKnown RBP23.55■■□□□ 1.36
SNRPA-205ENST00000598923 ABT1Q9ULW3 272 aaKnown RBP23.55■■□□□ 1.36
SNRPA-205ENST00000598923 FOXN1O15353 648 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 ALDH1L2Q3SY69 923 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 TTLL11Q8NHH1 800 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 ZC3H15Q8WU90 426 aaKnown RBP23.54■■□□□ 1.36
SNRPA-205ENST00000598923 DPF2Q92785 391 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 SRCIN1Q9C0H9 1055 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 WDR33Q9C0J8 1336 aaKnown RBP23.54■■□□□ 1.36
SNRPA-205ENST00000598923 SPEF2Q9C093 1822 aa23.54■■□□□ 1.36
SNRPA-205ENST00000598923 SHTN1A0MZ66 631 aa23.53■■□□□ 1.36
SNRPA-205ENST00000598923 PSMD14O00487 310 aa23.53■■□□□ 1.36
SNRPA-205ENST00000598923 TRPM4Q8TD43 1214 aa23.53■■□□□ 1.36
SNRPA-205ENST00000598923 GREM2Q9H772 168 aa23.53■■□□□ 1.36
SNRPA-205ENST00000598923 WBP1LQ9NX94 342 aa23.53■■□□□ 1.36
SNRPA-205ENST00000598923 C9orf78Q9NZ63 289 aaPredicted RBP23.53■■□□□ 1.36
SNRPA-205ENST00000598923 ZBTB12Q9Y330 459 aaPredicted RBP23.53■■□□□ 1.36
SNRPA-205ENST00000598923 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
SNRPA-205ENST00000598923 POLR2AP24928 1970 aaKnown RBP23.52■■□□□ 1.36
SNRPA-205ENST00000598923 ECE2O60344 883 aa23.52■■□□□ 1.36
SNRPA-205ENST00000598923 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
SNRPA-205ENST00000598923 CASP7P55210 303 aa23.52■■□□□ 1.36
SNRPA-205ENST00000598923 ANKRD18AQ8IVF6 992 aa23.52■■□□□ 1.36
SNRPA-205ENST00000598923 GPR101Q96P66 508 aaPredicted RBP23.52■■□□□ 1.36
SNRPA-205ENST00000598923 KCNQ5Q9NR82 932 aa23.52■■□□□ 1.36
SNRPA-205ENST00000598923 H7C1D1 291 aa23.51■■□□□ 1.35
SNRPA-205ENST00000598923 DOK7Q18PE1 504 aa23.51■■□□□ 1.35
SNRPA-205ENST00000598923 MICALL2Q8IY33 904 aa23.51■■□□□ 1.35
SNRPA-205ENST00000598923 GLIS2Q9BZE0 524 aaPredicted RBP23.51■■□□□ 1.35
SNRPA-205ENST00000598923 TLL2Q9Y6L7 1015 aa23.51■■□□□ 1.35
SNRPA-205ENST00000598923 PTPRCP08575 1304 aa23.51■■□□□ 1.35
SNRPA-205ENST00000598923 ALDH1L1O75891 902 aa23.5■■□□□ 1.35
SNRPA-205ENST00000598923 CDC5LQ99459 802 aaKnown RBP23.5■■□□□ 1.35
SNRPA-205ENST00000598923 PLA2G12BQ9BX93 195 aa23.5■■□□□ 1.35
SNRPA-205ENST00000598923 ZC3H12CQ9C0D7 883 aaKnown RBP23.5■■□□□ 1.35
SNRPA-205ENST00000598923 GRM8O00222 908 aa23.49■■□□□ 1.35
SNRPA-205ENST00000598923 UFL1O94874 794 aa23.49■■□□□ 1.35
SNRPA-205ENST00000598923 RPS12P25398 132 aaKnown RBP23.49■■□□□ 1.35
SNRPA-205ENST00000598923 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
SNRPA-205ENST00000598923 GGA1Q9UJY5 639 aa23.49■■□□□ 1.35
SNRPA-205ENST00000598923 NOB1Q9ULX3 412 aaKnown RBP23.49■■□□□ 1.35
SNRPA-205ENST00000598923 CHMP3Q9Y3E7 222 aa23.49■■□□□ 1.35
SNRPA-205ENST00000598923 AIDAQ96BJ3 306 aa23.48■■□□□ 1.35
SNRPA-205ENST00000598923 PRDM10Q9NQV6 1147 aa23.48■■□□□ 1.35
SNRPA-205ENST00000598923 CTCFP49711 727 aaPredicted RBP23.47■■□□□ 1.35
SNRPA-205ENST00000598923 RARSP54136 660 aaKnown RBP23.47■■□□□ 1.35
SNRPA-205ENST00000598923 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
SNRPA-205ENST00000598923 CDC37L1Q7L3B6 337 aa23.47■■□□□ 1.35
SNRPA-205ENST00000598923 SAMD7Q7Z3H4 446 aa23.47■■□□□ 1.35
SNRPA-205ENST00000598923 CAPNS2Q96L46 248 aa23.47■■□□□ 1.35
SNRPA-205ENST00000598923 ZNF609O15014 1411 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 CELF2O95319 508 aaKnown RBP23.46■■□□□ 1.35
SNRPA-205ENST00000598923 EGFRP00533 1210 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 CSF1RP07333 972 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 VIL1P09327 827 aaKnown RBP23.46■■□□□ 1.35
SNRPA-205ENST00000598923 ITGA6P23229 1130 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 ECE1P42892 770 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 XDHP47989 1333 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 SAPCD2Q86UD0 394 aa23.46■■□□□ 1.35
SNRPA-205ENST00000598923 ZNF646O15015 1829 aaPredicted RBP23.45■■□□□ 1.34
SNRPA-205ENST00000598923 IGHMBP2P38935 993 aaKnown RBP23.45■■□□□ 1.34
SNRPA-205ENST00000598923 FOXO4P98177 505 aa23.45■■□□□ 1.34
SNRPA-205ENST00000598923 MAP2K1Q02750 393 aaPredicted RBP23.45■■□□□ 1.34
SNRPA-205ENST00000598923 CYP4F22Q6NT55 531 aa23.45■■□□□ 1.34
SNRPA-205ENST00000598923 EPHA10Q5JZY3 1008 aa23.44■■□□□ 1.34
SNRPA-205ENST00000598923 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
SNRPA-205ENST00000598923 HHIPL1Q96JK4 782 aa23.44■■□□□ 1.34
SNRPA-205ENST00000598923 ANKRD18BA2A2Z9 1011 aa23.43■■□□□ 1.34
SNRPA-205ENST00000598923 NBPF7P0C2Y1 421 aaPredicted RBP23.43■■□□□ 1.34
SNRPA-205ENST00000598923 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms