RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 IMPACTQ9P2X3 320 aa14.73□□□□□ -0.05
ZNF558-205ENST00000597304 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 A0A087WWV3 80 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 FTOQ9C0B1 505 aaKnown RBP eCLIP14.72□□□□□ -0.05
ZNF558-205ENST00000597304 OSBPL5Q9H0X9 879 aaPredicted RBP14.72□□□□□ -0.05
ZNF558-205ENST00000597304 SIL1Q9H173 461 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 USP54Q70EL1 1684 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 FOSBP53539 338 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 FGD1P98174 961 aa14.72□□□□□ -0.05
ZNF558-205ENST00000597304 BMS1Q14692 1282 aaKnown RBP14.72□□□□□ -0.05
ZNF558-205ENST00000597304 ZNF396Q96N95 335 aaPredicted RBP14.72□□□□□ -0.05
ZNF558-205ENST00000597304 ATL3Q6DD88 541 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 FSIP1Q8NA03 581 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 ENGASEQ8NFI3 743 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 ZNF446Q9NWS9 450 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
ZNF558-205ENST00000597304 LMO7Q8WWI1 1683 aa14.71□□□□□ -0.05
ZNF558-205ENST00000597304 NPHP1O15259 732 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 NBPF11Q86T75 865 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 CCDC150Q8NCX0 1101 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 LINS1Q8NG48 757 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.06
ZNF558-205ENST00000597304 KAZALD1Q96I82 304 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 USP28Q96RU2 1077 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 LTN1O94822 1766 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 COL15A1P39059 1388 aa14.71□□□□□ -0.06
ZNF558-205ENST00000597304 MRC1P22897 1456 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 H2AFXP16104 143 aaPredicted RBP14.7□□□□□ -0.06
ZNF558-205ENST00000597304 ME1P48163 572 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 E4F1Q66K89 784 aaPredicted RBP14.7□□□□□ -0.06
ZNF558-205ENST00000597304 NSUN7Q8NE18 718 aaKnown RBP14.7□□□□□ -0.06
ZNF558-205ENST00000597304 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
ZNF558-205ENST00000597304 PPP1R13BQ96KQ4 1090 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 ST7Q9NRC1 585 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 UTYO14607 1347 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 ERICH4A6NGS2 130 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 PFKFB2O60825 505 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 ERCC6LQ2NKX8 1250 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 FBXW7Q969H0 707 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
ZNF558-205ENST00000597304 NCAPD2Q15021 1401 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
ZNF558-205ENST00000597304 NRDCO43847 1150 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 LTKP29376 864 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 ABTB2Q8N961 1025 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 LRRC2Q9BYS8 371 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 PTPDC1A2A3K4 754 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 CYP21A2P08686 494 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
ZNF558-205ENST00000597304 SYT10Q6XYQ8 523 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
ZNF558-205ENST00000597304 TMEM51Q9NW97 253 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 LAMA4Q16363 1823 aa14.69□□□□□ -0.06
ZNF558-205ENST00000597304 SMC2O95347 1197 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 TUBB4AP04350 444 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 SFPQP23246 707 aaKnown RBP eCLIP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 KCNJ6P48051 423 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 ERCC4Q92889 916 aaPredicted RBP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 DDX58O95786 925 aaKnown RBP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 GTF2E1P29083 439 aaPredicted RBP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 DHX8Q14562 1220 aaKnown RBP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 AKAP4Q5JQC9 854 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 MRPS27Q92552 414 aaKnown RBP14.68□□□□□ -0.06
ZNF558-205ENST00000597304 SDF4Q9BRK5 362 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 ZNF609O15014 1411 aa14.68□□□□□ -0.06
ZNF558-205ENST00000597304 HMGB1P09429 215 aaKnown RBP14.67□□□□□ -0.06
ZNF558-205ENST00000597304 CLCN6P51797 869 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
ZNF558-205ENST00000597304 CCDC129Q6ZRS4 1044 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 ATP5JP18859 108 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 ARMCX5Q6P1M9 558 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 XPO4Q9C0E2 1151 aaKnown RBP14.67□□□□□ -0.06
ZNF558-205ENST00000597304 IFNKQ9P0W0 207 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.67□□□□□ -0.06
ZNF558-205ENST00000597304 ABCC6O95255 1503 aa14.67□□□□□ -0.06
ZNF558-205ENST00000597304 CTDNEP1O95476 244 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 CDK11BP21127 795 aaKnown RBP14.66□□□□□ -0.06
ZNF558-205ENST00000597304 TPM4P67936 248 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 NBPF6Q5VWK0 638 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 FMR1NBQ8N0W7 255 aaPredicted RBP14.66□□□□□ -0.06
ZNF558-205ENST00000597304 NBPF4Q96M43 638 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 BPIFA3Q9BQP9 254 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 ZBTB22O15209 634 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 MCMDC2Q4G0Z9 681 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 ARHGAP29Q52LW3 1261 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 DHX32Q7L7V1 743 aaKnown RBP14.66□□□□□ -0.06
ZNF558-205ENST00000597304 LRRN4CLQ8ND94 238 aa14.66□□□□□ -0.06
ZNF558-205ENST00000597304 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms