RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 AOC3Q16853 763 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 FTSJ3Q8IY81 847 aaKnown RBP22.73■■□□□ 1.23
IRF3-216ENST00000597180 LARGE2Q8N3Y3 721 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 TBC1D16Q8TBP0 767 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 ANKIB1Q9P2G1 1089 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 WDR90Q96KV7 1748 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 GLTPD2A6NH11 291 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 FZD9O00144 591 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 GNAI3P08754 354 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 RLBP1P12271 317 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 JDP2Q8WYK2 163 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 GPBP1L1Q9HC44 474 aaPredicted RBP22.72■■□□□ 1.23
IRF3-216ENST00000597180 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
IRF3-216ENST00000597180 ZNF526Q8TF50 670 aaPredicted RBP22.71■■□□□ 1.23
IRF3-216ENST00000597180 ZNF594Q96JF6 807 aaPredicted RBP22.71■■□□□ 1.23
IRF3-216ENST00000597180 GGA1Q9UJY5 639 aa22.71■■□□□ 1.23
IRF3-216ENST00000597180 LRRFIP2Q9Y608 721 aaKnown RBP22.71■■□□□ 1.23
IRF3-216ENST00000597180 C6orf229H3BNL8 230 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 UFL1O94874 794 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 ATP2B4P23634 1241 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 DPY19L2Q6NUT2 758 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 NIM1KQ8IY84 436 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 EYA3Q99504 573 aa22.7■■□□□ 1.22
IRF3-216ENST00000597180 MS4A1P11836 297 aa22.69■■□□□ 1.22
IRF3-216ENST00000597180 WASHC4Q2M389 1173 aa22.69■■□□□ 1.22
IRF3-216ENST00000597180 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
IRF3-216ENST00000597180 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
IRF3-216ENST00000597180 SCN4AP35499 1836 aa22.68■■□□□ 1.22
IRF3-216ENST00000597180 PSME4Q14997 1843 aa22.68■■□□□ 1.22
IRF3-216ENST00000597180 ZNF541Q9H0D2 1346 aa22.68■■□□□ 1.22
IRF3-216ENST00000597180 CHRNDQ07001 517 aa22.68■■□□□ 1.22
IRF3-216ENST00000597180 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
IRF3-216ENST00000597180 LEMD3Q9Y2U8 911 aa22.67■■□□□ 1.22
IRF3-216ENST00000597180 SCN9AQ15858 1988 aa22.67■■□□□ 1.22
IRF3-216ENST00000597180 RFX5P48382 616 aaPredicted RBP22.66■■□□□ 1.22
IRF3-216ENST00000597180 ITPRIPQ8IWB1 547 aa22.66■■□□□ 1.22
IRF3-216ENST00000597180 PANK1Q8TE04 598 aa22.66■■□□□ 1.22
IRF3-216ENST00000597180 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
IRF3-216ENST00000597180 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
IRF3-216ENST00000597180 ZNRF3Q9ULT6 936 aa22.66■■□□□ 1.22
IRF3-216ENST00000597180 MED23Q9ULK4 1368 aa22.65■■□□□ 1.22
IRF3-216ENST00000597180 RIMBP2O15034 1052 aa22.65■■□□□ 1.22
IRF3-216ENST00000597180 EIF6P56537 245 aaKnown RBP22.65■■□□□ 1.22
IRF3-216ENST00000597180 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
IRF3-216ENST00000597180 WTIPA6NIX2 430 aaPredicted RBP22.64■■□□□ 1.21
IRF3-216ENST00000597180 PLIN1O60240 522 aa22.64■■□□□ 1.21
IRF3-216ENST00000597180 DDNO94850 711 aaPredicted RBP22.64■■□□□ 1.21
IRF3-216ENST00000597180 GNAI2P04899 355 aa22.64■■□□□ 1.21
IRF3-216ENST00000597180 MTX1Q13505 466 aa22.64■■□□□ 1.21
IRF3-216ENST00000597180 PUS3Q9BZE2 481 aaKnown RBP22.64■■□□□ 1.21
IRF3-216ENST00000597180 ZC3H12CQ9C0D7 883 aaKnown RBP22.64■■□□□ 1.21
IRF3-216ENST00000597180 RIPOR2Q9Y4F9 1068 aa22.64■■□□□ 1.21
IRF3-216ENST00000597180 ZNF804BA4D1E1 1349 aa22.63■■□□□ 1.21
IRF3-216ENST00000597180 ZBTB7BO15156 539 aaPredicted RBP22.63■■□□□ 1.21
IRF3-216ENST00000597180 GPC2Q8N158 579 aa22.63■■□□□ 1.21
IRF3-216ENST00000597180 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
IRF3-216ENST00000597180 L3MBTL3Q96JM7 780 aaPredicted RBP22.63■■□□□ 1.21
IRF3-216ENST00000597180 ZNF646O15015 1829 aaPredicted RBP22.62■■□□□ 1.21
IRF3-216ENST00000597180 YDJCA8MPS7 323 aa22.62■■□□□ 1.21
IRF3-216ENST00000597180 KIF3CO14782 793 aa22.62■■□□□ 1.21
IRF3-216ENST00000597180 PTPN12Q05209 780 aaKnown RBP22.62■■□□□ 1.21
IRF3-216ENST00000597180 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
IRF3-216ENST00000597180 RRAGCQ9HB90 399 aa22.62■■□□□ 1.21
IRF3-216ENST00000597180 MROH5Q6ZUA9 1318 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 POTECB2RU33 542 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 ECE2O60344 883 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 TAF5LO75529 589 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 CXCL9Q07325 125 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 PDE3AQ14432 1141 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 LRRC24Q50LG9 513 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
IRF3-216ENST00000597180 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
IRF3-216ENST00000597180 IRS2Q9Y4H2 1338 aa22.6■■□□□ 1.21
IRF3-216ENST00000597180 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
IRF3-216ENST00000597180 DOK7Q18PE1 504 aa22.6■■□□□ 1.21
IRF3-216ENST00000597180 C15orf52Q6ZUT6 534 aaKnown RBP22.6■■□□□ 1.21
IRF3-216ENST00000597180 FBXO3Q9UK99 471 aa22.6■■□□□ 1.21
IRF3-216ENST00000597180 EYA2O00167 538 aa22.59■■□□□ 1.21
IRF3-216ENST00000597180 VEGFAP15692 232 aaPredicted RBP22.59■■□□□ 1.21
IRF3-216ENST00000597180 KCNJ4P48050 445 aa22.59■■□□□ 1.21
IRF3-216ENST00000597180 COPRSQ9NQ92 184 aa22.59■■□□□ 1.21
IRF3-216ENST00000597180 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
IRF3-216ENST00000597180 KLRK1P26718 216 aa22.58■■□□□ 1.21
IRF3-216ENST00000597180 CIAPIN1Q6FI81 312 aa22.58■■□□□ 1.21
IRF3-216ENST00000597180 TXNRD3Q86VQ6 643 aa22.58■■□□□ 1.21
IRF3-216ENST00000597180 VGLL2Q8N8G2 317 aa22.58■■□□□ 1.21
IRF3-216ENST00000597180 SNAP23O00161 211 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 RAD17O75943 681 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 CIAO1O76071 339 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 UBE4AQ14139 1066 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 TNIP1Q15025 636 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 ATG9AQ7Z3C6 839 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 DDX19BQ9UMR2 479 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 COG6Q9Y2V7 657 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 GJA3Q9Y6H8 435 aa22.57■■□□□ 1.2
IRF3-216ENST00000597180 IQCA1LA6NCM1 817 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 G3V3G9 751 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 METTL24Q5JXM2 366 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms