RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 MYH3P11055 1940 aa8.38□□□□□ -1.07
AC003973.2-201ENST00000596778 BBOX1O75936 387 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 GNAI3P08754 354 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 DPEP1P16444 411 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 CCDC152Q4G0S7 254 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 TTLL6Q8N841 843 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
AC003973.2-201ENST00000596778 GRIN3BO60391 1043 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 CTSWP56202 376 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 MTX1Q13505 466 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 E2F4Q16254 413 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 DALRD3Q5D0E6 543 aaKnown RBP8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 SMYD5Q6GMV2 418 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 SLC4A10Q6U841 1118 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 UBE3BQ7Z3V4 1068 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 C9orf78Q9NZ63 289 aaPredicted RBP8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 SNED1Q8TER0 1413 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 LRRC37AA6NMS7 1700 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 LTBP3Q9NS15 1303 aa8.36□□□□□ -1.07
AC003973.2-201ENST00000596778 A0A0G2JLW4 131 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 FOXO4P98177 505 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 GRAPQ13588 217 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 AAMPQ13685 434 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 GRAPLQ8TC17 118 aaPredicted RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 RPGRQ92834 1020 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 FRAT1Q92837 279 aaPredicted RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 KAZALD1Q96I82 304 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 VPS33BQ9H267 617 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 NBPF7P0C2Y1 421 aaPredicted RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 PDIA4P13667 645 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 CHRNA5P30532 468 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 MVPQ14764 893 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 MS4A3Q96HJ5 214 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 CDC5LQ99459 802 aaKnown RBP8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 DDX19BQ9UMR2 479 aa8.35□□□□□ -1.07
AC003973.2-201ENST00000596778 UBTFL1P0CB47 393 aaPredicted RBP8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 PYGBP11216 843 aa8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 RLBP1P12271 317 aa8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 RPS8P62241 208 aaKnown RBP8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 RTKN2Q8IZC4 609 aa8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 ATP6V0A2Q9Y487 856 aa8.34□□□□□ -1.07
AC003973.2-201ENST00000596778 ZC3H4Q9UPT8 1303 aaKnown RBP8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 FER1L6Q2WGJ9 1857 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 LTBP1Q14766 1721 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 GNAI2P04899 355 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 ATN1P54259 1190 aaPredicted RBP8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 CCDC93Q567U6 631 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 SUCLG2Q96I99 432 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 PSMD1Q99460 953 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 TMEM121BQ9BXQ6 578 aaPredicted RBP8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 RTFDC1Q9BY42 306 aaPredicted RBP8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
AC003973.2-201ENST00000596778 SLX4Q8IY92 1834 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 ANKRD18BA2A2Z9 1011 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 PPEF1O14829 653 aaPredicted RBP8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 ITGA6P23229 1130 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 LMBR1LQ6UX01 489 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 MEIS3Q99687 375 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 BICC1Q9H694 974 aaKnown RBP8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 GREM2Q9H772 168 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 ZBTB40Q9NUA8 1239 aa8.32□□□□□ -1.08
AC003973.2-201ENST00000596778 APBB1O00213 710 aa8.31□□□□□ -1.08
AC003973.2-201ENST00000596778 GPR162Q16538 588 aa8.31□□□□□ -1.08
AC003973.2-201ENST00000596778 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
AC003973.2-201ENST00000596778 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
AC003973.2-201ENST00000596778 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
AC003973.2-201ENST00000596778 ITPRIPQ8IWB1 547 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms