RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 EYA1Q99502 592 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 TTYH1Q9H313 450 aaPredicted RBP4.4□□□□□ -1.71
VRK3-204ENST00000593912 SEMA6BQ9H3T3 888 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.4□□□□□ -1.71
VRK3-204ENST00000593912 FZD1Q9UP38 647 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 FLT4P35916 1363 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 RAB3GAP2Q9H2M9 1393 aa4.4□□□□□ -1.71
VRK3-204ENST00000593912 CFAP47Q6ZTR5 3102 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 SPTBN4Q9H254 2564 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 DCHS1Q96JQ0 3298 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 PSMD14O00487 310 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 CAMTA2O94983 1202 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 FKBP1BP68106 108 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 NHLH1Q02575 133 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 TNIP1Q15025 636 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 TMEM31Q5JXX7 168 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 DIS3LQ8TF46 1054 aaKnown RBP4.39□□□□□ -1.71
VRK3-204ENST00000593912 U2AF1L4Q8WU68 220 aaKnown RBP4.39□□□□□ -1.71
VRK3-204ENST00000593912 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 RNF208Q9H0X6 261 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 C11orf16Q9NQ32 467 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 EMILIN1Q9Y6C2 1016 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 KMT2BQ9UMN6 2715 aaPredicted RBP4.39□□□□□ -1.71
VRK3-204ENST00000593912 ABCC12Q96J65 1359 aa4.39□□□□□ -1.71
VRK3-204ENST00000593912 A0A087WZG4 1122 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 RGL2O15211 777 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 GJB1P08034 283 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 MDM2Q00987 491 aaPredicted RBP4.38□□□□□ -1.71
VRK3-204ENST00000593912 CC2D2BQ6DHV5 1058 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 ZNF530Q6P9A1 599 aaPredicted RBP4.38□□□□□ -1.71
VRK3-204ENST00000593912 NKX2-3Q8TAU0 364 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 KHSRPQ92945 711 aaKnown RBP eCLIP4.38□□□□□ -1.71
VRK3-204ENST00000593912 PAWRQ96IZ0 340 aaKnown RBP4.38□□□□□ -1.71
VRK3-204ENST00000593912 ASB2Q96Q27 587 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 PHOX2BQ99453 314 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 GGNBP2Q9H3C7 697 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 KIF24Q5T7B8 1368 aa4.38□□□□□ -1.71
VRK3-204ENST00000593912 LAMB2P55268 1798 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 SCN9AQ15858 1988 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 ST20-MTHFSA0A0A6YYL1 179 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 MANSC4A6NHS7 340 aaPredicted RBP4.37□□□□□ -1.71
VRK3-204ENST00000593912 PPM1GO15355 546 aaPredicted RBP4.37□□□□□ -1.71
VRK3-204ENST00000593912 HSP90AB1P08238 724 aaKnown RBP4.37□□□□□ -1.71
VRK3-204ENST00000593912 PIP4K2AP48426 406 aaPredicted RBP4.37□□□□□ -1.71
VRK3-204ENST00000593912 MTHFSP49914 203 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 TCIRG1Q13488 830 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 KCTD2Q14681 263 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 DPF2Q92785 391 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 STAC3Q96MF2 364 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 PTPN18Q99952 460 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 UNC93B1Q9H1C4 597 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 KCNQ5Q9NR82 932 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 WASHC2AQ641Q2 1341 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 UBR2Q8IWV8 1755 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 CHD8Q9HCK8 2581 aa4.37□□□□□ -1.71
VRK3-204ENST00000593912 DUOX1Q9NRD9 1551 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 DDX60LQ5H9U9 1706 aaKnown RBP4.36□□□□□ -1.71
VRK3-204ENST00000593912 CTGFP29279 349 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 GJA5P36382 358 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 FOXK2Q01167 660 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 KIAA2012Q0VF49 1180 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 SCARF1Q14162 830 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 CRY2Q49AN0 593 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 POTEGQ6S5H5 508 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 ATXN2LQ8WWM7 1075 aaKnown RBP4.36□□□□□ -1.71
VRK3-204ENST00000593912 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 CLMNQ96JQ2 1002 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 DBNDD1Q9H9R9 158 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 SPINK5Q9NQ38 1064 aaPredicted RBP4.36□□□□□ -1.71
VRK3-204ENST00000593912 TERF2IPQ9NYB0 399 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 THEGQ9P2T0 379 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 BIN2Q9UBW5 565 aaPredicted RBP4.36□□□□□ -1.71
VRK3-204ENST00000593912 KIF20BQ96Q89 1820 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 EPG5Q9HCE0 2579 aa4.36□□□□□ -1.71
VRK3-204ENST00000593912 UNC79Q9P2D8 2635 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 SGPL1O95470 568 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 TFRCP02786 760 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 GRK4P32298 578 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 TNNT2P45379 298 aaPredicted RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 MRPS5P82675 430 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 COL9A2Q14055 689 aaPredicted RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 POTEEQ6S8J3 1075 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 C3orf67Q6ZVT6 689 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 DZIP3Q86Y13 1208 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 IL27Q8NEV9 243 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 RPGRQ92834 1020 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 ANGEL1Q9UNK9 670 aaKnown RBP4.35□□□□□ -1.71
VRK3-204ENST00000593912 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 RTL9Q8NET4 1388 aa4.35□□□□□ -1.71
VRK3-204ENST00000593912 CHD9Q3L8U1 2897 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 SMIM22K7EJ46 135 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 FYB1O15117 783 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 GPR37L1O60883 481 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 A1BGP04217 495 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 INHBEP58166 350 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 LACTBP83111 547 aaPredicted RBP4.34□□□□□ -1.71
VRK3-204ENST00000593912 GRIN2CQ14957 1233 aa4.34□□□□□ -1.71
VRK3-204ENST00000593912 ARHGEF6Q15052 776 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms