RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
PRKCSH-218ENST00000593053 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-218ENST00000593053 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-218ENST00000593053 GREM2Q9H772 168 aa16.71■□□□□ 0.27
PRKCSH-218ENST00000593053 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
PRKCSH-218ENST00000593053 PSMD14O00487 310 aa16.7■□□□□ 0.26
PRKCSH-218ENST00000593053 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-218ENST00000593053 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
PRKCSH-218ENST00000593053 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 F6X3S4 739 aa16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 KCNQ5Q9NR82 932 aa16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 XDHP47989 1333 aa16.69■□□□□ 0.26
PRKCSH-218ENST00000593053 CNTNAP1P78357 1384 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 RTL9Q8NET4 1388 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 PCNTO95613 3336 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 G3V3G9 751 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 CASP7P55210 303 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 MICALL2Q8IY33 904 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
PRKCSH-218ENST00000593053 H7C1D1 291 aa16.67■□□□□ 0.26
PRKCSH-218ENST00000593053 TRAF5O00463 557 aa16.67■□□□□ 0.26
PRKCSH-218ENST00000593053 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-218ENST00000593053 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
PRKCSH-218ENST00000593053 BSDC1Q9NW68 430 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-218ENST00000593053 HSPA1AP0DMV8 641 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 HSPA1BP0DMV9 641 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 DPF2Q92785 391 aa16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 ABT1Q9ULW3 272 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
PRKCSH-218ENST00000593053 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-218ENST00000593053 ITGA6P23229 1130 aa16.65■□□□□ 0.26
PRKCSH-218ENST00000593053 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-218ENST00000593053 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-218ENST00000593053 VEGFBP49765 207 aa16.65■□□□□ 0.26
PRKCSH-218ENST00000593053 CSF1RP07333 972 aa16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 TBC1D10BQ4KMP7 808 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 GLIS2Q9BZE0 524 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
PRKCSH-218ENST00000593053 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
PRKCSH-218ENST00000593053 VIL1P09327 827 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-218ENST00000593053 DEFB115Q30KQ5 88 aa16.63■□□□□ 0.25
PRKCSH-218ENST00000593053 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
PRKCSH-218ENST00000593053 SLC4A10Q6U841 1118 aa16.63■□□□□ 0.25
PRKCSH-218ENST00000593053 E9PSI1 815 aa16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 EGFRP00533 1210 aa16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 CST9Q5W186 159 aa16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
PRKCSH-218ENST00000593053 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 GRM8O00222 908 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 FOXO4P98177 505 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 CDC37L1Q7L3B6 337 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 MED23Q9ULK4 1368 aa16.61■□□□□ 0.25
PRKCSH-218ENST00000593053 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 LEMD3Q9Y2U8 911 aa16.6■□□□□ 0.25
PRKCSH-218ENST00000593053 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 EPHA10Q5JZY3 1008 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 LMBR1LQ6UX01 489 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 PAXIP1Q6ZW49 1069 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 ZNF804BA4D1E1 1349 aa16.59■□□□□ 0.25
PRKCSH-218ENST00000593053 KLRK1P26718 216 aa16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 CHRNDQ07001 517 aa16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 COA1Q9GZY4 146 aa16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-218ENST00000593053 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 KCNJ4P48050 445 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 GRM1Q13255 1194 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 DLK2Q6UY11 383 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
PRKCSH-218ENST00000593053 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms