RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 DALRD3Q5D0E6 543 aaKnown RBP13.2□□□□□ -0.3
SMAD4-214ENST00000592186 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
SMAD4-214ENST00000592186 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
SMAD4-214ENST00000592186 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
SMAD4-214ENST00000592186 RIPOR2Q9Y4F9 1068 aa13.2□□□□□ -0.3
SMAD4-214ENST00000592186 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
SMAD4-214ENST00000592186 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
SMAD4-214ENST00000592186 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
SMAD4-214ENST00000592186 SIL1Q9H173 461 aa13.19□□□□□ -0.3
SMAD4-214ENST00000592186 CEP126Q9P2H0 1117 aa13.19□□□□□ -0.3
SMAD4-214ENST00000592186 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
SMAD4-214ENST00000592186 PA2G4Q9UQ80 394 aaKnown RBP13.19□□□□□ -0.3
SMAD4-214ENST00000592186 IGHDP01880 384 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
SMAD4-214ENST00000592186 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
SMAD4-214ENST00000592186 MYH3P11055 1940 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 RTKN2Q8IZC4 609 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
SMAD4-214ENST00000592186 EXOC6BQ9Y2D4 811 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 ANKRD31Q8N7Z5 1873 aa13.17□□□□□ -0.3
SMAD4-214ENST00000592186 TNRC6CQ9HCJ0 1690 aaKnown RBP13.17□□□□□ -0.3
SMAD4-214ENST00000592186 PDE8BO95263 885 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
SMAD4-214ENST00000592186 SASH1O94885 1247 aa13.15□□□□□ -0.3
SMAD4-214ENST00000592186 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
SMAD4-214ENST00000592186 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
SMAD4-214ENST00000592186 MPNDQ8N594 471 aa13.15□□□□□ -0.3
SMAD4-214ENST00000592186 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
SMAD4-214ENST00000592186 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
SMAD4-214ENST00000592186 XDHP47989 1333 aa13.15□□□□□ -0.3
SMAD4-214ENST00000592186 LRP5O75197 1615 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 C21orf2O43822 256 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 KCNJ4P48050 445 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 TFCP2Q12800 502 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
SMAD4-214ENST00000592186 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
SMAD4-214ENST00000592186 SUPT20HQ8NEM7 779 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
SMAD4-214ENST00000592186 NUCB1Q02818 461 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 LPIN2Q92539 896 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 VPS33BQ9H267 617 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 APBB1O00213 710 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
SMAD4-214ENST00000592186 GPSM2P81274 684 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 HELBQ8NG08 1087 aaPredicted RBP13.13□□□□□ -0.31
SMAD4-214ENST00000592186 PSMD1Q99460 953 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 EYA3Q99504 573 aa13.13□□□□□ -0.31
SMAD4-214ENST00000592186 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
SMAD4-214ENST00000592186 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 TAF5LO75529 589 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
SMAD4-214ENST00000592186 SLC5A1P13866 664 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 C15orf52Q6ZUT6 534 aaKnown RBP13.12□□□□□ -0.31
SMAD4-214ENST00000592186 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 TBC1D16Q8TBP0 767 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
SMAD4-214ENST00000592186 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
SMAD4-214ENST00000592186 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 UFL1O94874 794 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 FGFR2P21802 821 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 ZC3H12CQ9C0D7 883 aaKnown RBP13.11□□□□□ -0.31
SMAD4-214ENST00000592186 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
SMAD4-214ENST00000592186 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
SMAD4-214ENST00000592186 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
SMAD4-214ENST00000592186 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 TIMM10P62072 90 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMAD4-214ENST00000592186 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 AACSQ86V21 672 aa13.1□□□□□ -0.31
SMAD4-214ENST00000592186 EAF2Q96CJ1 260 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms