RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
PTBP1-216ENST00000590887 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
PTBP1-216ENST00000590887 ABCC12Q96J65 1359 aa15.79■□□□□ 0.12
PTBP1-216ENST00000590887 A0A1B0GUL7 405 aa15.79■□□□□ 0.12
PTBP1-216ENST00000590887 PDE8BO95263 885 aa15.79■□□□□ 0.12
PTBP1-216ENST00000590887 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
PTBP1-216ENST00000590887 SLC5A1P13866 664 aa15.79■□□□□ 0.12
PTBP1-216ENST00000590887 PUM3Q15397 648 aaKnown RBP15.79■□□□□ 0.12
PTBP1-216ENST00000590887 TBC1D9Q6ZT07 1266 aa15.79■□□□□ 0.12
PTBP1-216ENST00000590887 BSDC1Q9NW68 430 aaPredicted RBP15.79■□□□□ 0.12
PTBP1-216ENST00000590887 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 ZNF827Q17R98 1081 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 SMIM5Q71RC9 77 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 AMIGO3Q86WK7 504 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
PTBP1-216ENST00000590887 LPIN2Q92539 896 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
PTBP1-216ENST00000590887 RBM17Q96I25 401 aaKnown RBP15.78■□□□□ 0.12
PTBP1-216ENST00000590887 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
PTBP1-216ENST00000590887 ANKRD2Q9GZV1 360 aa15.78■□□□□ 0.12
PTBP1-216ENST00000590887 QSER1Q2KHR3 1735 aa15.77■□□□□ 0.12
PTBP1-216ENST00000590887 EPB41L2O43491 1005 aaKnown RBP15.77■□□□□ 0.12
PTBP1-216ENST00000590887 UQCRFS1P1P0C7P4 283 aa15.77■□□□□ 0.12
PTBP1-216ENST00000590887 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.12
PTBP1-216ENST00000590887 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.12
PTBP1-216ENST00000590887 DBNLQ9UJU6 430 aaKnown RBP15.77■□□□□ 0.12
PTBP1-216ENST00000590887 ZNF609O15014 1411 aa15.77■□□□□ 0.11
PTBP1-216ENST00000590887 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
PTBP1-216ENST00000590887 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
PTBP1-216ENST00000590887 TIMM10P62072 90 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
PTBP1-216ENST00000590887 PRR5LQ6MZQ0 368 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 TMC4Q7Z404 712 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 DBNDD2Q9BQY9 259 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 DIAPH3Q9NSV4 1193 aa15.76■□□□□ 0.11
PTBP1-216ENST00000590887 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
PTBP1-216ENST00000590887 MCCP23508 829 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 PDE6BP35913 854 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 TSHZ3Q63HK5 1081 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 XAGE2Q96GT9 111 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 ZNF512BQ96KM6 892 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-216ENST00000590887 HAUS7Q99871 368 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 C22orf23Q9BZE7 217 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-216ENST00000590887 BOLA2Q9H3K6 86 aa15.75■□□□□ 0.11
PTBP1-216ENST00000590887 PNPLA7Q6ZV29 1317 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 GRAPQ13588 217 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 UBE4AQ14139 1066 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 KIAA1211Q6ZU35 1233 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 IL27Q8NEV9 243 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 GRAPLQ8TC17 118 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-216ENST00000590887 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 GNL3LQ9NVN8 582 aaKnown RBP15.74■□□□□ 0.11
PTBP1-216ENST00000590887 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-216ENST00000590887 RFX7Q2KHR2 1363 aa15.74■□□□□ 0.11
PTBP1-216ENST00000590887 LRP5O75197 1615 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 BBOX1O75936 387 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 CHMLP26374 656 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 KCNJ4P48050 445 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 CHRNDQ07001 517 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 TTF1Q15361 905 aaPredicted RBP15.73■□□□□ 0.11
PTBP1-216ENST00000590887 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
PTBP1-216ENST00000590887 CAVIN4Q5BKX8 364 aa15.72■□□□□ 0.11
PTBP1-216ENST00000590887 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
PTBP1-216ENST00000590887 VGLL2Q8N8G2 317 aa15.72■□□□□ 0.11
PTBP1-216ENST00000590887 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
PTBP1-216ENST00000590887 TLR7Q9NYK1 1049 aaKnown RBP15.72■□□□□ 0.11
PTBP1-216ENST00000590887 RAD50Q92878 1312 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 CRY2Q49AN0 593 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
PTBP1-216ENST00000590887 ESYT1Q9BSJ8 1104 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 CASZ1Q86V15 1759 aa15.71■□□□□ 0.11
PTBP1-216ENST00000590887 SEC24BO95487 1268 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 MAP4K4O95819 1239 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 ZFYP08048 801 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 MMP10P09238 476 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 FGFR2P21802 821 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 DDR1Q08345 913 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 BECN1Q14457 450 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.11e-9■□□□□ 10.5
PTBP1-216ENST00000590887 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
PTBP1-216ENST00000590887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-216ENST00000590887 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
PTBP1-216ENST00000590887 NPR1P16066 1061 aa15.69■□□□□ 0.1
PTBP1-216ENST00000590887 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
PTBP1-216ENST00000590887 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
PTBP1-216ENST00000590887 CELF1Q92879 486 aaKnown RBP15.69■□□□□ 0.1
PTBP1-216ENST00000590887 IGSF3O75054 1194 aa15.68■□□□□ 0.1
PTBP1-216ENST00000590887 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms