RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LRRC7Q96NW7 1537 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 TNNI3KQ59H18 835 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 PPRC1Q5VV67 1664 aaKnown RBP19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 FPGT-TNNI3KV9GXZ4 949 aa19.85■□□□□ 0.77
SMARCA4-215ENST00000590574 PNPLA6Q8IY17 1366 aa19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 RNF113AO15541 343 aaKnown RBP19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 TTF1Q15361 905 aaPredicted RBP19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 BEND3Q5T5X7 828 aa19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 TMCO3Q6UWJ1 677 aa19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 CCDC150Q8NCX0 1101 aa19.84■□□□□ 0.77
SMARCA4-215ENST00000590574 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
SMARCA4-215ENST00000590574 ERCC4Q92889 916 aaPredicted RBP19.83■□□□□ 0.77
SMARCA4-215ENST00000590574 NDUFB9Q9Y6M9 179 aa19.83■□□□□ 0.77
SMARCA4-215ENST00000590574 ERICH4A6NGS2 130 aa19.83■□□□□ 0.77
SMARCA4-215ENST00000590574 TMX1Q9H3N1 280 aa19.83■□□□□ 0.77
SMARCA4-215ENST00000590574 ZFYP08048 801 aaPredicted RBP19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 METTL22Q9BUU2 404 aaPredicted RBP19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 CPSF1Q10570 1443 aaKnown RBP19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 CCDC196A0A1B0GTZ2 297 aa19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 PRC1O43663 620 aa19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 CASQ1P31415 396 aa19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 SYKP43405 635 aa19.83■□□□□ 0.76
SMARCA4-215ENST00000590574 SLC5A1P13866 664 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 ZNF500O60304 480 aaPredicted RBP19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 DBNDD2Q9BQY9 259 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 SLC26A6Q9BXS9 759 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 LSG1Q9H089 658 aaKnown RBP19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 ARHGAP31Q2M1Z3 1444 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 MARCKSP29966 332 aaPredicted RBP19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 HSP90AB3PQ58FF7 597 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 RUFY1Q96T51 708 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 ALG1Q9BT22 464 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 TM6SF1Q9BZW5 370 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 AK7Q96M32 723 aa19.82■□□□□ 0.76
SMARCA4-215ENST00000590574 USP6P35125 1406 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 RASEFQ8IZ41 740 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 KIF2CQ99661 725 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 LEO1Q8WVC0 666 aaPredicted RBP19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 CLSTN2Q9H4D0 955 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 TERF1P54274 439 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 STIM1Q13586 685 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 CABLES1Q8TDN4 633 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 ZNHIT6Q9NWK9 470 aaKnown RBP19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 CCDC102BQ68D86 513 aa19.81■□□□□ 0.76
SMARCA4-215ENST00000590574 CCDC94Q9BW85 323 aaPredicted RBP19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 CBX8Q9HC52 389 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 ZHX1Q9UKY1 873 aaPredicted RBP19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 LMTK2Q8IWU2 1503 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 SPTLC2O15270 562 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 CUL4AQ13619 759 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 ARHGAP29Q52LW3 1261 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 MED14O60244 1454 aa19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 CWC15Q9P013 229 aaKnown RBP19.8■□□□□ 0.76
SMARCA4-215ENST00000590574 CDK5RAP3Q96JB5 506 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 MTMR6Q9Y217 621 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 ATP2B3Q16720 1220 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 HELLSQ9NRZ9 838 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 JAK2O60674 1132 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 PDE4CQ08493 712 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 ZCRB1Q8TBF4 217 aaKnown RBP19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 ZSWIM6Q9HCJ5 1215 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 NSFL1CQ9UNZ2 370 aaKnown RBP19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 KIAA1210Q9ULL0 1709 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 ERLIN1O75477 346 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 UBASH3AP57075 661 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 TIMM10P62072 90 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 EDC3Q96F86 508 aaKnown RBP19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
SMARCA4-215ENST00000590574 ALKQ9UM73 1620 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 CPLX3Q8WVH0 158 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 A0A0D9SFI3 127 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 GCKRQ14397 625 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 KDRP35968 1356 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 MYRIPQ8NFW9 859 aa19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 EAF2Q96CJ1 260 aaPredicted RBP19.78■□□□□ 0.76
SMARCA4-215ENST00000590574 INO80Q9ULG1 1556 aaPredicted RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 ZBTB43O43298 467 aa19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 RANBP6O60518 1105 aaKnown RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 MFSD6Q6ZSS7 791 aa19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 NCOA5Q9HCD5 579 aaKnown RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 GIGYF1O75420 1035 aaPredicted RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 ADCK5Q3MIX3 580 aa19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 SLC9C2Q5TAH2 1124 aa19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 RNF41Q9H4P4 317 aaPredicted RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.77■□□□□ 0.765e-6■□□□□ 10.3
SMARCA4-215ENST00000590574 V9GYY5 206 aaPredicted RBP19.77■□□□□ 0.76
SMARCA4-215ENST00000590574 ABCA9Q8IUA7 1624 aa19.77■□□□□ 0.75
SMARCA4-215ENST00000590574 HSP90AA4PQ58FG1 418 aa19.77■□□□□ 0.75
SMARCA4-215ENST00000590574 BICDL1Q6ZP65 573 aa19.77■□□□□ 0.75
SMARCA4-215ENST00000590574 A0A1B0GVL5 298 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 EPS15P42566 896 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 LEKR1Q6ZMV7 388 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 TEX13AQ9BXU3 409 aaPredicted RBP19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 LMOD1P29536 600 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms