RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■□□□□ 10.8
VAT1-206ENST00000589709 ANKRD18AQ8IVF6 992 aa15.66■□□□□ 0.1
VAT1-206ENST00000589709 TTLL11Q8NHH1 800 aa15.66■□□□□ 0.1
VAT1-206ENST00000589709 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
VAT1-206ENST00000589709 GGA1Q9UJY5 639 aa15.66■□□□□ 0.1
VAT1-206ENST00000589709 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
VAT1-206ENST00000589709 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 VAMP4O75379 141 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 UFL1O94874 794 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 CTSWP56202 376 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 MICALL2Q8IY33 904 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 TNS4Q8IZW8 715 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 TRPM4Q8TD43 1214 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 CDC5LQ99459 802 aaKnown RBP15.65■□□□□ 0.1
VAT1-206ENST00000589709 WBP1LQ9NX94 342 aa15.65■□□□□ 0.1
VAT1-206ENST00000589709 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
VAT1-206ENST00000589709 WDR33Q9C0J8 1336 aaKnown RBP15.65■□□□□ 0.1
VAT1-206ENST00000589709 VIL1P09327 827 aaKnown RBP15.64■□□□□ 0.09
VAT1-206ENST00000589709 FLIIQ13045 1269 aa15.64■□□□□ 0.09
VAT1-206ENST00000589709 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
VAT1-206ENST00000589709 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
VAT1-206ENST00000589709 CCDC85AQ96PX6 553 aaPredicted RBP15.64■□□□□ 0.09
VAT1-206ENST00000589709 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
VAT1-206ENST00000589709 KCNQ5Q9NR82 932 aa15.64■□□□□ 0.09
VAT1-206ENST00000589709 TLL2Q9Y6L7 1015 aa15.64■□□□□ 0.09
VAT1-206ENST00000589709 XDHP47989 1333 aa15.64■□□□□ 0.09
VAT1-206ENST00000589709 SHTN1A0MZ66 631 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 FOXN1O15353 648 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 ATP2B4P23634 1241 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 ECE1P42892 770 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 CTCFP49711 727 aaPredicted RBP15.63■□□□□ 0.09
VAT1-206ENST00000589709 GCKRQ14397 625 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 AIDAQ96BJ3 306 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 PLA2G12BQ9BX93 195 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 PRDM10Q9NQV6 1147 aa15.63■□□□□ 0.09
VAT1-206ENST00000589709 BSDC1Q9NW68 430 aaPredicted RBP15.63■□□□□ 0.09
VAT1-206ENST00000589709 G3V3G9 751 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
VAT1-206ENST00000589709 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
VAT1-206ENST00000589709 EXOSC9Q06265 439 aaKnown RBP15.62■□□□□ 0.09
VAT1-206ENST00000589709 DCAF8Q5TAQ9 597 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 SAMD7Q7Z3H4 446 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 LINS1Q8NG48 757 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 DNAAF4Q8WXU2 420 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 HHIPL1Q96JK4 782 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 CAPNS2Q96L46 248 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 GREM2Q9H772 168 aa15.62■□□□□ 0.09
VAT1-206ENST00000589709 CASP7P55210 303 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 FKBP5Q13451 457 aaPredicted RBP15.61■□□□□ 0.09
VAT1-206ENST00000589709 UBE3BQ7Z3V4 1068 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 SAPCD2Q86UD0 394 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 MINPP1Q9UNW1 487 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
VAT1-206ENST00000589709 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
VAT1-206ENST00000589709 ZNF609O15014 1411 aa15.6■□□□□ 0.09
VAT1-206ENST00000589709 CSF1RP07333 972 aa15.6■□□□□ 0.09
VAT1-206ENST00000589709 TBC1D10BQ4KMP7 808 aaPredicted RBP15.6■□□□□ 0.09
VAT1-206ENST00000589709 AGBL3Q8NEM8 1001 aa15.6■□□□□ 0.09
VAT1-206ENST00000589709 CACNA1FO60840 1977 aa15.59■□□□□ 0.09
VAT1-206ENST00000589709 EGFRP00533 1210 aa15.59■□□□□ 0.09
VAT1-206ENST00000589709 MAP2K2P36507 400 aa15.59■□□□□ 0.09
VAT1-206ENST00000589709 ZNF280AP59817 542 aaPredicted RBP15.59■□□□□ 0.09
VAT1-206ENST00000589709 CYP4F22Q6NT55 531 aa15.59■□□□□ 0.09
VAT1-206ENST00000589709 USP48Q86UV5 1035 aa15.59■□□□□ 0.09
VAT1-206ENST00000589709 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
VAT1-206ENST00000589709 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
VAT1-206ENST00000589709 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
VAT1-206ENST00000589709 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
VAT1-206ENST00000589709 DCPSQ96C86 337 aaKnown RBP15.58■□□□□ 0.08
VAT1-206ENST00000589709 GMLQ99445 158 aa15.58■□□□□ 0.08
VAT1-206ENST00000589709 LEMD3Q9Y2U8 911 aa15.58■□□□□ 0.08
VAT1-206ENST00000589709 MED23Q9ULK4 1368 aa15.58■□□□□ 0.08
VAT1-206ENST00000589709 SCN9AQ15858 1988 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 CCT4P50991 539 aaKnown RBP15.57■□□□□ 0.08
VAT1-206ENST00000589709 KIF4BQ2VIQ3 1234 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 RBM26Q5T8P6 1007 aaKnown RBP15.57■□□□□ 0.08
VAT1-206ENST00000589709 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 KRT26Q7Z3Y9 468 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 ANKRD2Q9GZV1 360 aa15.57■□□□□ 0.08
VAT1-206ENST00000589709 WTIPA6NIX2 430 aaPredicted RBP15.56■□□□□ 0.08
VAT1-206ENST00000589709 HSPA8P11142 646 aaKnown RBP15.56■□□□□ 0.08
VAT1-206ENST00000589709 ITGA6P23229 1130 aa15.56■□□□□ 0.08
VAT1-206ENST00000589709 LBX1P52954 281 aa15.56■□□□□ 0.08
VAT1-206ENST00000589709 BEND3Q5T5X7 828 aa15.56■□□□□ 0.08
VAT1-206ENST00000589709 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
VAT1-206ENST00000589709 MYH3P11055 1940 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 THSD7BQ9C0I4 1608 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 BEGAINQ9BUH8 593 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 COA1Q9GZY4 146 aa15.55■□□□□ 0.08
VAT1-206ENST00000589709 ZNF521Q96K83 1311 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms