RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PTPN12Q05209 780 aaKnown RBP24.34■■□□□ 1.49
CIRBP-220ENST00000588917 CEP85Q6P2H3 762 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 MPNDQ8N594 471 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 SUPT20HQ8NEM7 779 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 ZNF594Q96JF6 807 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-220ENST00000588917 COPRSQ9NQ92 184 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 MINPP1Q9UNW1 487 aa24.34■■□□□ 1.49
CIRBP-220ENST00000588917 SLX4Q8IY92 1834 aa24.33■■□□□ 1.49
CIRBP-220ENST00000588917 DPP8Q6V1X1 898 aaPredicted RBP24.33■■□□□ 1.49
CIRBP-220ENST00000588917 SSH3Q8TE77 659 aa24.33■■□□□ 1.49
CIRBP-220ENST00000588917 RNF181Q9P0P0 153 aa24.33■■□□□ 1.49
CIRBP-220ENST00000588917 NSFL1CQ9UNZ2 370 aaKnown RBP24.33■■□□□ 1.49
CIRBP-220ENST00000588917 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.48
CIRBP-220ENST00000588917 POLA2Q14181 598 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 PSMD1Q99460 953 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 VPS33BQ9H267 617 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 PODXL2Q9NZ53 605 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 ANKIB1Q9P2G1 1089 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 KDM2BQ8NHM5 1336 aa24.32■■□□□ 1.48
CIRBP-220ENST00000588917 PNMA6EA0A0J9YXQ4 647 aa24.31■■□□□ 1.48
CIRBP-220ENST00000588917 CIAO1O76071 339 aa24.31■■□□□ 1.48
CIRBP-220ENST00000588917 FKBP4Q02790 459 aaKnown RBP eCLIP24.31■■□□□ 1.48
CIRBP-220ENST00000588917 XDHP47989 1333 aa24.31■■□□□ 1.48
CIRBP-220ENST00000588917 MROH5Q6ZUA9 1318 aa24.31■■□□□ 1.48
CIRBP-220ENST00000588917 EYA2O00167 538 aa24.3■■□□□ 1.48
CIRBP-220ENST00000588917 C16orf71Q8IYS4 520 aaPredicted RBP24.3■■□□□ 1.48
CIRBP-220ENST00000588917 TAOK3Q9H2K8 898 aa24.3■■□□□ 1.48
CIRBP-220ENST00000588917 RIPOR2Q9Y4F9 1068 aa24.3■■□□□ 1.48
CIRBP-220ENST00000588917 LTBP3Q9NS15 1303 aa24.3■■□□□ 1.48
CIRBP-220ENST00000588917 ATP2B4P23634 1241 aa24.29■■□□□ 1.48
CIRBP-220ENST00000588917 IL15P40933 162 aaPredicted RBP24.29■■□□□ 1.48
CIRBP-220ENST00000588917 G3BP1Q13283 466 aaKnown RBP eCLIP24.29■■□□□ 1.48
CIRBP-220ENST00000588917 OLFM4Q6UX06 510 aa24.29■■□□□ 1.48
CIRBP-220ENST00000588917 KLHDC4Q8TBB5 520 aa24.29■■□□□ 1.48
CIRBP-220ENST00000588917 RBM46Q8TBY0 533 aaKnown RBP24.29■■□□□ 1.48
CIRBP-220ENST00000588917 RTFDC1Q9BY42 306 aaPredicted RBP24.29■■□□□ 1.48
CIRBP-220ENST00000588917 LEMD3Q9Y2U8 911 aa24.29■■□□□ 1.48
CIRBP-220ENST00000588917 GPSM2P81274 684 aa24.28■■□□□ 1.48
CIRBP-220ENST00000588917 CHRNDQ07001 517 aa24.28■■□□□ 1.48
CIRBP-220ENST00000588917 IFFO2Q5TF58 517 aa24.28■■□□□ 1.48
CIRBP-220ENST00000588917 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
CIRBP-220ENST00000588917 GGA1Q9UJY5 639 aa24.28■■□□□ 1.48
CIRBP-220ENST00000588917 HSP90AB4PQ58FF6 505 aa24.27■■□□□ 1.48
CIRBP-220ENST00000588917 EYA3Q99504 573 aa24.27■■□□□ 1.48
CIRBP-220ENST00000588917 PUS3Q9BZE2 481 aaKnown RBP24.27■■□□□ 1.48
CIRBP-220ENST00000588917 C6orf229H3BNL8 230 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 SURF6O75683 361 aaKnown RBP24.26■■□□□ 1.47
CIRBP-220ENST00000588917 LRRC24Q50LG9 513 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 METTL24Q5JXM2 366 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 SIL1Q9H173 461 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 CEP126Q9P2H0 1117 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 TAF1P21675 1872 aa24.26■■□□□ 1.47
CIRBP-220ENST00000588917 NFKBIEO00221 500 aa24.25■■□□□ 1.47
CIRBP-220ENST00000588917 NEFLP07196 543 aa24.25■■□□□ 1.47
CIRBP-220ENST00000588917 KCNJ4P48050 445 aa24.25■■□□□ 1.47
CIRBP-220ENST00000588917 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
CIRBP-220ENST00000588917 PA2G4Q9UQ80 394 aaKnown RBP24.25■■□□□ 1.47
CIRBP-220ENST00000588917 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
CIRBP-220ENST00000588917 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 PDE8BO95263 885 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 LMNB1P20700 586 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
CIRBP-220ENST00000588917 ATG9AQ7Z3C6 839 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 SIRT2Q8IXJ6 389 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 ZC3H12CQ9C0D7 883 aaKnown RBP24.24■■□□□ 1.47
CIRBP-220ENST00000588917 RRAGCQ9HB90 399 aa24.24■■□□□ 1.47
CIRBP-220ENST00000588917 ZC3H4Q9UPT8 1303 aaKnown RBP24.24■■□□□ 1.47
CIRBP-220ENST00000588917 UFL1O94874 794 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 RASSF7Q02833 373 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 FSTL1Q12841 308 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 UBE4AQ14139 1066 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 WASHC4Q2M389 1173 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 DNAJC5GQ8N7S2 189 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 POLLQ9UGP5 575 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 SNED1Q8TER0 1413 aa24.23■■□□□ 1.47
CIRBP-220ENST00000588917 ZNF804BA4D1E1 1349 aa24.22■■□□□ 1.47
CIRBP-220ENST00000588917 OS9Q13438 667 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-220ENST00000588917 ERC1Q8IUD2 1116 aa24.22■■□□□ 1.47
CIRBP-220ENST00000588917 HELBQ8NG08 1087 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-220ENST00000588917 PCDHB15Q9Y5E8 787 aa24.22■■□□□ 1.47
CIRBP-220ENST00000588917 LRRC37AA6NMS7 1700 aa24.21■■□□□ 1.47
CIRBP-220ENST00000588917 COL4A1P02462 1669 aa24.21■■□□□ 1.47
CIRBP-220ENST00000588917 TAF5LO75529 589 aa24.21■■□□□ 1.47
CIRBP-220ENST00000588917 IARSP41252 1262 aaKnown RBP24.21■■□□□ 1.47
CIRBP-220ENST00000588917 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
CIRBP-220ENST00000588917 JDP2Q8WYK2 163 aa24.2■■□□□ 1.46
CIRBP-220ENST00000588917 ZNF277Q9NRM2 450 aaPredicted RBP24.2■■□□□ 1.46
CIRBP-220ENST00000588917 PPIP5K2O43314 1243 aa24.19■■□□□ 1.46
CIRBP-220ENST00000588917 RAB11FIP3O75154 756 aa24.19■■□□□ 1.46
CIRBP-220ENST00000588917 KIAA2012Q0VF49 1180 aa24.19■■□□□ 1.46
CIRBP-220ENST00000588917 RWDD1Q9H446 243 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-220ENST00000588917 FER1L6Q2WGJ9 1857 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 G3V3G9 751 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 PRELPP51888 382 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 PUM3Q15397 648 aaKnown RBP24.18■■□□□ 1.46
CIRBP-220ENST00000588917 DCAF8Q5TAQ9 597 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 C15orf52Q6ZUT6 534 aaKnown RBP24.18■■□□□ 1.46
CIRBP-220ENST00000588917 SLC51AQ86UW1 340 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 LARGE2Q8N3Y3 721 aa24.18■■□□□ 1.46
CIRBP-220ENST00000588917 VGLL2Q8N8G2 317 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms