RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ECE2O60344 883 aa22.97■■□□□ 1.27
SRSF1-208ENST00000584773 FMR1Q06787 632 aaKnown RBP eCLIP22.97■■□□□ 1.27
SRSF1-208ENST00000584773 BEND3Q5T5X7 828 aa22.97■■□□□ 1.27
SRSF1-208ENST00000584773 CNTROBQ8N137 903 aa22.97■■□□□ 1.27
SRSF1-208ENST00000584773 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
SRSF1-208ENST00000584773 ZBTB12Q9Y330 459 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-208ENST00000584773 FAM161AQ3B820 660 aa22.96■■□□□ 1.27
SRSF1-208ENST00000584773 CDCA7LQ96GN5 454 aa22.96■■□□□ 1.27
SRSF1-208ENST00000584773 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
SRSF1-208ENST00000584773 GGA1Q9UJY5 639 aa22.96■■□□□ 1.27
SRSF1-208ENST00000584773 PCNTO95613 3336 aa22.95■■□□□ 1.27
SRSF1-208ENST00000584773 PSMD14O00487 310 aa22.95■■□□□ 1.26
SRSF1-208ENST00000584773 EYA3Q99504 573 aa22.95■■□□□ 1.26
SRSF1-208ENST00000584773 PLA2G12BQ9BX93 195 aa22.95■■□□□ 1.26
SRSF1-208ENST00000584773 BCL2L13Q9BXK5 485 aa22.95■■□□□ 1.26
SRSF1-208ENST00000584773 RTL9Q8NET4 1388 aa22.95■■□□□ 1.26
SRSF1-208ENST00000584773 TNIP1Q15025 636 aa22.94■■□□□ 1.26
SRSF1-208ENST00000584773 CREBZFQ9NS37 354 aa22.94■■□□□ 1.26
SRSF1-208ENST00000584773 ADARB2Q9NS39 739 aaKnown RBP22.94■■□□□ 1.26
SRSF1-208ENST00000584773 MKRN1Q9UHC7 482 aaKnown RBP22.94■■□□□ 1.26
SRSF1-208ENST00000584773 E9PSI1 815 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 ITGA6P23229 1130 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 USP50Q70EL3 339 aaPredicted RBP22.93■■□□□ 1.26
SRSF1-208ENST00000584773 JMYQ8N9B5 988 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 TRPM4Q8TD43 1214 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 ZC3H12CQ9C0D7 883 aaKnown RBP22.93■■□□□ 1.26
SRSF1-208ENST00000584773 XDHP47989 1333 aa22.93■■□□□ 1.26
SRSF1-208ENST00000584773 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
SRSF1-208ENST00000584773 SLC4A10Q6U841 1118 aa22.92■■□□□ 1.26
SRSF1-208ENST00000584773 BSDC1Q9NW68 430 aaPredicted RBP22.92■■□□□ 1.26
SRSF1-208ENST00000584773 MINPP1Q9UNW1 487 aa22.92■■□□□ 1.26
SRSF1-208ENST00000584773 CSF1RP07333 972 aa22.91■■□□□ 1.26
SRSF1-208ENST00000584773 HIRAP54198 1017 aaPredicted RBP22.91■■□□□ 1.26
SRSF1-208ENST00000584773 MRPL50Q8N5N7 158 aaKnown RBP22.91■■□□□ 1.26
SRSF1-208ENST00000584773 CNOT7Q9UIV1 285 aaKnown RBP22.91■■□□□ 1.26
SRSF1-208ENST00000584773 TRAF5O00463 557 aa22.9■■□□□ 1.26
SRSF1-208ENST00000584773 FOXO4P98177 505 aa22.9■■□□□ 1.26
SRSF1-208ENST00000584773 EPHA10Q5JZY3 1008 aa22.9■■□□□ 1.26
SRSF1-208ENST00000584773 MICALL2Q8IY33 904 aa22.9■■□□□ 1.26
SRSF1-208ENST00000584773 TMEM88BA6NKF7 163 aa22.89■■□□□ 1.26
SRSF1-208ENST00000584773 ATP2B4P23634 1241 aa22.89■■□□□ 1.26
SRSF1-208ENST00000584773 G3V3G9 751 aa22.88■■□□□ 1.25
SRSF1-208ENST00000584773 EGFRP00533 1210 aa22.88■■□□□ 1.25
SRSF1-208ENST00000584773 IGHMBP2P38935 993 aaKnown RBP22.88■■□□□ 1.25
SRSF1-208ENST00000584773 DCAF8Q5TAQ9 597 aa22.88■■□□□ 1.25
SRSF1-208ENST00000584773 SSH1Q8WYL5 1049 aa22.88■■□□□ 1.25
SRSF1-208ENST00000584773 PSME4Q14997 1843 aa22.88■■□□□ 1.25
SRSF1-208ENST00000584773 GRM8O00222 908 aa22.87■■□□□ 1.25
SRSF1-208ENST00000584773 SAMD7Q7Z3H4 446 aa22.87■■□□□ 1.25
SRSF1-208ENST00000584773 CHMP3Q9Y3E7 222 aa22.87■■□□□ 1.25
SRSF1-208ENST00000584773 A0A1B0GUL6 1792 aa22.87■■□□□ 1.25
SRSF1-208ENST00000584773 KLRK1P26718 216 aa22.86■■□□□ 1.25
SRSF1-208ENST00000584773 CCT4P50991 539 aaKnown RBP22.86■■□□□ 1.25
SRSF1-208ENST00000584773 TBC1D10BQ4KMP7 808 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-208ENST00000584773 GLIS2Q9BZE0 524 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-208ENST00000584773 SRCIN1Q9C0H9 1055 aa22.86■■□□□ 1.25
SRSF1-208ENST00000584773 TRPM7Q96QT4 1865 aa22.86■■□□□ 1.25
SRSF1-208ENST00000584773 CNTNAP1P78357 1384 aa22.86■■□□□ 1.25
SRSF1-208ENST00000584773 LMBR1LQ6UX01 489 aa22.85■■□□□ 1.25
SRSF1-208ENST00000584773 TXNRD3Q86VQ6 643 aa22.85■■□□□ 1.25
SRSF1-208ENST00000584773 ANKRD18BA2A2Z9 1011 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 H7C1D1 291 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 SNAP23O00161 211 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 VIL1P09327 827 aaKnown RBP22.84■■□□□ 1.25
SRSF1-208ENST00000584773 RBM26Q5T8P6 1007 aaKnown RBP22.84■■□□□ 1.25
SRSF1-208ENST00000584773 DPF2Q92785 391 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 MPHOSPH8Q99549 860 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 C9orf78Q9NZ63 289 aaPredicted RBP22.84■■□□□ 1.25
SRSF1-208ENST00000584773 MED23Q9ULK4 1368 aa22.84■■□□□ 1.25
SRSF1-208ENST00000584773 ZNF646O15015 1829 aaPredicted RBP22.84■■□□□ 1.25
SRSF1-208ENST00000584773 ALDH1L1O75891 902 aa22.83■■□□□ 1.25
SRSF1-208ENST00000584773 DLK2Q6UY11 383 aa22.83■■□□□ 1.25
SRSF1-208ENST00000584773 TRMT2AQ8IZ69 625 aaKnown RBP22.83■■□□□ 1.25
SRSF1-208ENST00000584773 SUCLG2Q96I99 432 aa22.83■■□□□ 1.25
SRSF1-208ENST00000584773 ZNF594Q96JF6 807 aaPredicted RBP22.83■■□□□ 1.25
SRSF1-208ENST00000584773 NBPF7P0C2Y1 421 aaPredicted RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 CHRNDQ07001 517 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 CST9Q5W186 159 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 HELBQ8NG08 1087 aaPredicted RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 KAZALD1Q96I82 304 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 POLR2AP24928 1970 aaKnown RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 TAF5LO75529 589 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 RPS12P25398 132 aaKnown RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 VEGFBP49765 207 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 IFIT5Q13325 482 aaKnown RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 MXD3Q9BW11 206 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 PGAP2Q9UHJ9 254 aa22.82■■□□□ 1.24
SRSF1-208ENST00000584773 ABT1Q9ULW3 272 aaKnown RBP22.82■■□□□ 1.24
SRSF1-208ENST00000584773 ZNF804BA4D1E1 1349 aa22.81■■□□□ 1.24
SRSF1-208ENST00000584773 ASTN2O75129 1339 aaPredicted RBP22.81■■□□□ 1.24
SRSF1-208ENST00000584773 HSPA1AP0DMV8 641 aaKnown RBP22.81■■□□□ 1.24
SRSF1-208ENST00000584773 HSPA1BP0DMV9 641 aaKnown RBP22.81■■□□□ 1.24
SRSF1-208ENST00000584773 RSBN1LQ6PCB5 846 aaPredicted RBP22.81■■□□□ 1.24
SRSF1-208ENST00000584773 MIER1Q8N108 512 aa22.81■■□□□ 1.24
SRSF1-208ENST00000584773 LEMD3Q9Y2U8 911 aa22.81■■□□□ 1.24
SRSF1-208ENST00000584773 SMC4Q9NTJ3 1288 aa22.8■■□□□ 1.24
SRSF1-208ENST00000584773 PTPRCP08575 1304 aa22.79■■□□□ 1.24
SRSF1-208ENST00000584773 KIF4BQ2VIQ3 1234 aa22.79■■□□□ 1.24
SRSF1-208ENST00000584773 PODNQ7Z5L7 613 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms