RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
GGA3-219ENST00000584550 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
GGA3-219ENST00000584550 NEFMP07197 916 aa13.4□□□□□ -0.26
GGA3-219ENST00000584550 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
GGA3-219ENST00000584550 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
GGA3-219ENST00000584550 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
GGA3-219ENST00000584550 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
GGA3-219ENST00000584550 G3V3G9 751 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
GGA3-219ENST00000584550 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 XAGE3Q8WTP9 111 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
GGA3-219ENST00000584550 COL4A1P02462 1669 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 GPR25O00155 361 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
GGA3-219ENST00000584550 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
GGA3-219ENST00000584550 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 FBXO46Q6PJ61 603 aaPredicted RBP13.38□□□□□ -0.27
GGA3-219ENST00000584550 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 EYA3Q99504 573 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 SCN9AQ15858 1988 aa13.38□□□□□ -0.27
GGA3-219ENST00000584550 CENPFP49454 3210 aa13.37□□□□□ -0.27
GGA3-219ENST00000584550 FAM89AQ96GI7 184 aa13.37□□□□□ -0.27
GGA3-219ENST00000584550 ZC3H12CQ9C0D7 883 aaKnown RBP13.37□□□□□ -0.27
GGA3-219ENST00000584550 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
GGA3-219ENST00000584550 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
GGA3-219ENST00000584550 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
GGA3-219ENST00000584550 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
GGA3-219ENST00000584550 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 TM4SF4P48230 202 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 FKBP1BP68106 108 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
GGA3-219ENST00000584550 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
GGA3-219ENST00000584550 FKTNO75072 461 aa13.34□□□□□ -0.27
GGA3-219ENST00000584550 UFL1O94874 794 aa13.34□□□□□ -0.27
GGA3-219ENST00000584550 ZNF280AP59817 542 aaPredicted RBP13.34□□□□□ -0.27
GGA3-219ENST00000584550 PRKG1Q13976 671 aa13.34□□□□□ -0.27
GGA3-219ENST00000584550 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
GGA3-219ENST00000584550 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
GGA3-219ENST00000584550 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
GGA3-219ENST00000584550 BRCA2P51587 3418 aa13.33□□□□□ -0.28
GGA3-219ENST00000584550 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
GGA3-219ENST00000584550 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
GGA3-219ENST00000584550 HTTP42858 3142 aa13.33□□□□□ -0.28
GGA3-219ENST00000584550 RALBP1Q15311 655 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 KRT24Q2M2I5 525 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 AGBL3Q8NEM8 1001 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 SEC31BQ9NQW1 1179 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
GGA3-219ENST00000584550 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
GGA3-219ENST00000584550 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
GGA3-219ENST00000584550 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
GGA3-219ENST00000584550 MXD3Q9BW11 206 aa13.31□□□□□ -0.28
GGA3-219ENST00000584550 CHPF2Q9P2E5 772 aa13.31□□□□□ -0.28
GGA3-219ENST00000584550 GGA1Q9UJY5 639 aa13.31□□□□□ -0.28
GGA3-219ENST00000584550 RIPK4P57078 832 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
GGA3-219ENST00000584550 NOM1Q5C9Z4 860 aaKnown RBP13.3□□□□□ -0.28
GGA3-219ENST00000584550 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
GGA3-219ENST00000584550 GMLQ99445 158 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
GGA3-219ENST00000584550 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
GGA3-219ENST00000584550 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
GGA3-219ENST00000584550 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
GGA3-219ENST00000584550 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
GGA3-219ENST00000584550 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
GGA3-219ENST00000584550 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
GGA3-219ENST00000584550 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
GGA3-219ENST00000584550 NF2P35240 595 aa13.28□□□□□ -0.28
GGA3-219ENST00000584550 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
GGA3-219ENST00000584550 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
GGA3-219ENST00000584550 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
GGA3-219ENST00000584550 SZT2Q5T011 3432 aa13.27□□□□□ -0.28
GGA3-219ENST00000584550 SASH1O94885 1247 aa13.27□□□□□ -0.29
GGA3-219ENST00000584550 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
GGA3-219ENST00000584550 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
GGA3-219ENST00000584550 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
GGA3-219ENST00000584550 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
GGA3-219ENST00000584550 PSME4Q14997 1843 aa13.27□□□□□ -0.29
GGA3-219ENST00000584550 WNT10BO00744 389 aa13.26□□□□□ -0.29
GGA3-219ENST00000584550 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
GGA3-219ENST00000584550 CFHR5Q9BXR6 569 aa13.26□□□□□ -0.29
GGA3-219ENST00000584550 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
GGA3-219ENST00000584550 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
GGA3-219ENST00000584550 ANGEL1Q9UNK9 670 aaKnown RBP13.26□□□□□ -0.29
GGA3-219ENST00000584550 ZNF609O15014 1411 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 ALDH1A1P00352 501 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms