RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 IL15P40933 162 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 STK3Q13188 491 aa15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 KCPQ6ZWJ8 1503 aa15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 CARD10Q9BWT7 1032 aa15.68■□□□□ 0.1
CSNK1D-222ENST00000584377 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 MCM5P33992 734 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 TIMM10P62072 90 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 GPR108Q9NPR9 543 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 STRN4Q9NRL3 753 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 GOLIM4O00461 696 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 CYP21A2P08686 494 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 UBR2Q8IWV8 1755 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 SH3TC1Q8TE82 1336 aa15.67■□□□□ 0.1
CSNK1D-222ENST00000584377 EYA2O00167 538 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 SLAIN2Q9P270 581 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 KRT85P78386 507 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 LRRC24Q50LG9 513 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 CCDC39Q9UFE4 941 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 PALLDQ8WX93 1383 aa15.66■□□□□ 0.1
CSNK1D-222ENST00000584377 GTF2E1P29083 439 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 EVA1CP58658 441 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 Q6ZUG5 572 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 GTF3C6Q969F1 213 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
CSNK1D-222ENST00000584377 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 GTPBP4Q9BZE4 634 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 ATG3Q9NT62 314 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 ZNF330Q9Y3S2 320 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 TJP1Q07157 1748 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 A0A1B0GUL7 405 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 CIAO1O76071 339 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 KIF20AO95235 890 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 HCLS1P14317 486 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 TTC6Q86TZ1 520 aa15.64■□□□□ 0.09
CSNK1D-222ENST00000584377 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 GIMAP6Q6P9H5 292 aa15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 IFIT1P09914 478 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-222ENST00000584377 JAK2O60674 1132 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 PTMAP06454 111 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 ELP1O95163 1332 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 TCIRG1Q13488 830 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 ZMYM1Q5SVZ6 1142 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 BRF1Q92994 677 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 DSCC1Q9BVC3 393 aa15.62■□□□□ 0.09
CSNK1D-222ENST00000584377 CBX1P83916 185 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 LRRC2Q9BYS8 371 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 FUCA2Q9BTY2 467 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 SCAND2PQ9GZW5 306 aaPredicted RBP15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 USP25Q9UHP3 1055 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 MYRIPQ8NFW9 859 aa15.61■□□□□ 0.09
CSNK1D-222ENST00000584377 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 RNF113AO15541 343 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 SPATA32Q96LK8 384 aa15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 TFIP11Q9UBB9 837 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
CSNK1D-222ENST00000584377 MAST3O60307 1309 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 SCRN1Q12765 414 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 KIF6Q6ZMV9 814 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 GOLGA6L4A6NEF3 574 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 FKBP4Q02790 459 aaKnown RBP eCLIP15.59■□□□□ 0.095e-7■□□□□ 8.6
CSNK1D-222ENST00000584377 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 DDX11Q96FC9 970 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 ASAP1Q9ULH1 1129 aa15.59■□□□□ 0.09
CSNK1D-222ENST00000584377 ZNF335Q9H4Z2 1342 aaPredicted RBP15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 H3BQV1 296 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 TRIM28Q13263 835 aaKnown RBP15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 CCDC158Q5M9N0 1113 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 GORABQ5T7V8 394 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 IFFO2Q5TF58 517 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 FAM89AQ96GI7 184 aa15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 CCDC85AQ96PX6 553 aaPredicted RBP15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.09
CSNK1D-222ENST00000584377 TSC1Q92574 1164 aa15.58■□□□□ 0.08
CSNK1D-222ENST00000584377 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
CSNK1D-222ENST00000584377 PFKFB2O60825 505 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms