RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 RIMBP2O15034 1052 aa25.4■■□□□ 1.66
SS18-218ENST00000581021 BICC1Q9H694 974 aaKnown RBP25.4■■□□□ 1.66
SS18-218ENST00000581021 ANKIB1Q9P2G1 1089 aa25.4■■□□□ 1.66
SS18-218ENST00000581021 ZNRF3Q9ULT6 936 aa25.4■■□□□ 1.66
SS18-218ENST00000581021 CHMP3Q9Y3E7 222 aa25.4■■□□□ 1.66
SS18-218ENST00000581021 XDHP47989 1333 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 TOMM70O94826 608 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 TRIM27P14373 513 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 WASHC4Q2M389 1173 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 GPC2Q8N158 579 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 ARHGAP45Q92619 1136 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 ZNF594Q96JF6 807 aaPredicted RBP25.39■■□□□ 1.66
SS18-218ENST00000581021 GGA1Q9UJY5 639 aa25.39■■□□□ 1.66
SS18-218ENST00000581021 ANKRD18BA2A2Z9 1011 aa25.38■■□□□ 1.65
SS18-218ENST00000581021 IGHMBP2P38935 993 aaKnown RBP25.38■■□□□ 1.65
SS18-218ENST00000581021 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
SS18-218ENST00000581021 EIF6P56537 245 aaKnown RBP25.38■■□□□ 1.65
SS18-218ENST00000581021 CXCL9Q07325 125 aa25.38■■□□□ 1.65
SS18-218ENST00000581021 RABL6Q3YEC7 729 aaPredicted RBP25.38■■□□□ 1.65
SS18-218ENST00000581021 DBNDD1Q9H9R9 158 aa25.38■■□□□ 1.65
SS18-218ENST00000581021 A0A1B0GUL6 1792 aa25.38■■□□□ 1.65
SS18-218ENST00000581021 IFIT5Q13325 482 aaKnown RBP25.37■■□□□ 1.65
SS18-218ENST00000581021 GJA3Q9Y6H8 435 aa25.37■■□□□ 1.65
SS18-218ENST00000581021 POTEIP0CG38 1075 aa25.36■■□□□ 1.65
SS18-218ENST00000581021 POTEJP0CG39 1038 aa25.36■■□□□ 1.65
SS18-218ENST00000581021 DOK7Q18PE1 504 aa25.36■■□□□ 1.65
SS18-218ENST00000581021 RBM46Q8TBY0 533 aaKnown RBP25.36■■□□□ 1.65
SS18-218ENST00000581021 FRAT1Q92837 279 aaPredicted RBP25.36■■□□□ 1.65
SS18-218ENST00000581021 SCN4AP35499 1836 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 RAD17O75943 681 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 SCNN1DP51172 638 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 ATF7IPQ6VMQ6 1270 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 MPHOSPH8Q99549 860 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 KCNQ5Q9NR82 932 aa25.35■■□□□ 1.65
SS18-218ENST00000581021 KLRK1P26718 216 aa25.34■■□□□ 1.65
SS18-218ENST00000581021 CHRNDQ07001 517 aa25.34■■□□□ 1.65
SS18-218ENST00000581021 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
SS18-218ENST00000581021 EYA3Q99504 573 aa25.34■■□□□ 1.65
SS18-218ENST00000581021 MEIS3Q99687 375 aa25.34■■□□□ 1.65
SS18-218ENST00000581021 TAF1DQ9H5J8 278 aaPredicted RBP25.34■■□□□ 1.65
SS18-218ENST00000581021 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
SS18-218ENST00000581021 SNAP23O00161 211 aa25.33■■□□□ 1.65
SS18-218ENST00000581021 ECE2O60344 883 aa25.33■■□□□ 1.65
SS18-218ENST00000581021 ATP2B4P23634 1241 aa25.33■■□□□ 1.65
SS18-218ENST00000581021 CCDC57Q2TAC2 916 aa25.33■■□□□ 1.65
SS18-218ENST00000581021 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
SS18-218ENST00000581021 TXNRD3Q86VQ6 643 aa25.32■■□□□ 1.64
SS18-218ENST00000581021 CLUAP1Q96AJ1 413 aa25.32■■□□□ 1.64
SS18-218ENST00000581021 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
SS18-218ENST00000581021 ADAMTSL1Q8N6G6 1762 aa25.31■■□□□ 1.64
SS18-218ENST00000581021 CIAPIN1Q6FI81 312 aa25.31■■□□□ 1.64
SS18-218ENST00000581021 HELBQ8NG08 1087 aaPredicted RBP25.31■■□□□ 1.64
SS18-218ENST00000581021 PUS3Q9BZE2 481 aaKnown RBP25.31■■□□□ 1.64
SS18-218ENST00000581021 ZC3H12CQ9C0D7 883 aaKnown RBP25.31■■□□□ 1.64
SS18-218ENST00000581021 HACL1Q9UJ83 578 aa25.31■■□□□ 1.64
SS18-218ENST00000581021 IQCA1LA6NCM1 817 aa25.3■■□□□ 1.64
SS18-218ENST00000581021 IPO8O15397 1037 aaKnown RBP25.3■■□□□ 1.64
SS18-218ENST00000581021 TAF5LO75529 589 aa25.3■■□□□ 1.64
SS18-218ENST00000581021 IRS2Q9Y4H2 1338 aa25.3■■□□□ 1.64
SS18-218ENST00000581021 UBTFL1P0CB47 393 aaPredicted RBP25.29■■□□□ 1.64
SS18-218ENST00000581021 EPHX2P34913 555 aa25.29■■□□□ 1.64
SS18-218ENST00000581021 EPS15P42566 896 aa25.29■■□□□ 1.64
SS18-218ENST00000581021 GMPSP49915 693 aaPredicted RBP25.29■■□□□ 1.64
SS18-218ENST00000581021 KLHDC4Q8TBB5 520 aa25.29■■□□□ 1.64
SS18-218ENST00000581021 ANKRD2Q9GZV1 360 aa25.29■■□□□ 1.64
SS18-218ENST00000581021 ZNF804BA4D1E1 1349 aa25.29■■□□□ 1.64
SS18-218ENST00000581021 SHTN1A0MZ66 631 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 PSMD14O00487 310 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 TAF7LQ5H9L4 462 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 ZKSCAN2Q63HK3 967 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 LDHAL6AQ6ZMR3 332 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 LRRFIP2Q9Y608 721 aaKnown RBP25.28■■□□□ 1.64
SS18-218ENST00000581021 CEP350Q5VT06 3117 aa25.28■■□□□ 1.64
SS18-218ENST00000581021 RLBP1P12271 317 aa25.27■■□□□ 1.64
SS18-218ENST00000581021 RFX5P48382 616 aaPredicted RBP25.27■■□□□ 1.64
SS18-218ENST00000581021 TMEM57Q8N5G2 664 aa25.27■■□□□ 1.64
SS18-218ENST00000581021 SMC1BQ8NDV3 1235 aa25.27■■□□□ 1.64
SS18-218ENST00000581021 GPRC5DQ9NZD1 345 aa25.27■■□□□ 1.64
SS18-218ENST00000581021 LEMD3Q9Y2U8 911 aa25.27■■□□□ 1.64
SS18-218ENST00000581021 ZBTB12Q9Y330 459 aaPredicted RBP25.27■■□□□ 1.64
SS18-218ENST00000581021 ZNF646O15015 1829 aaPredicted RBP25.26■■□□□ 1.63
SS18-218ENST00000581021 FSTL1Q12841 308 aa25.26■■□□□ 1.63
SS18-218ENST00000581021 CNNM1Q9NRU3 951 aa25.26■■□□□ 1.63
SS18-218ENST00000581021 HSPA6P17066 643 aa25.25■■□□□ 1.63
SS18-218ENST00000581021 TNIP1Q15025 636 aa25.25■■□□□ 1.63
SS18-218ENST00000581021 LRRC24Q50LG9 513 aa25.25■■□□□ 1.63
SS18-218ENST00000581021 RIPOR2Q9Y4F9 1068 aa25.25■■□□□ 1.63
SS18-218ENST00000581021 PSME4Q14997 1843 aa25.24■■□□□ 1.63
SS18-218ENST00000581021 EAPPQ56P03 285 aaPredicted RBP25.24■■□□□ 1.63
SS18-218ENST00000581021 PLIN1O60240 522 aa25.22■■□□□ 1.63
SS18-218ENST00000581021 LMOD1P29536 600 aaPredicted RBP25.22■■□□□ 1.63
SS18-218ENST00000581021 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
SS18-218ENST00000581021 LDHDQ86WU2 507 aa25.22■■□□□ 1.63
SS18-218ENST00000581021 VIL1P09327 827 aaKnown RBP25.21■■□□□ 1.63
SS18-218ENST00000581021 KCNJ4P48050 445 aa25.21■■□□□ 1.63
SS18-218ENST00000581021 PTPN12Q05209 780 aaKnown RBP25.21■■□□□ 1.63
SS18-218ENST00000581021 VGLL2Q8N8G2 317 aa25.21■■□□□ 1.63
SS18-218ENST00000581021 C15orf52Q6ZUT6 534 aaKnown RBP25.2■■□□□ 1.62
SS18-218ENST00000581021 TRPM4Q8TD43 1214 aa25.2■■□□□ 1.62
SS18-218ENST00000581021 ZNF609O15014 1411 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms