RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ITGA6P23229 1130 aa15.99■□□□□ 0.15
CBX1-206ENST00000581003 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
CBX1-206ENST00000581003 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
CBX1-206ENST00000581003 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
CBX1-206ENST00000581003 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
CBX1-206ENST00000581003 GRM8O00222 908 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 CSF1RP07333 972 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 KLRK1P26718 216 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 APLP1P51693 650 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
CBX1-206ENST00000581003 KAZALD1Q96I82 304 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 SUCLG2Q96I99 432 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 SMC4Q9NTJ3 1288 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 MINPP1Q9UNW1 487 aa15.98■□□□□ 0.15
CBX1-206ENST00000581003 SNAP23O00161 211 aa15.97■□□□□ 0.15
CBX1-206ENST00000581003 ECE2O60344 883 aa15.97■□□□□ 0.15
CBX1-206ENST00000581003 NBPF7P0C2Y1 421 aaPredicted RBP15.97■□□□□ 0.15
CBX1-206ENST00000581003 FMR1Q06787 632 aaKnown RBP eCLIP15.97■□□□□ 0.15
CBX1-206ENST00000581003 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
CBX1-206ENST00000581003 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
CBX1-206ENST00000581003 VPS33BQ9H267 617 aa15.97■□□□□ 0.15
CBX1-206ENST00000581003 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
CBX1-206ENST00000581003 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 XDHP47989 1333 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 PSMD14O00487 310 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 LMBR1LQ6UX01 489 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 LDHDQ86WU2 507 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 ZNF594Q96JF6 807 aaPredicted RBP15.96■□□□□ 0.15
CBX1-206ENST00000581003 GPRC5DQ9NZD1 345 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 CHMP3Q9Y3E7 222 aa15.96■□□□□ 0.15
CBX1-206ENST00000581003 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
CBX1-206ENST00000581003 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
CBX1-206ENST00000581003 TXNRD3Q86VQ6 643 aa15.95■□□□□ 0.14
CBX1-206ENST00000581003 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
CBX1-206ENST00000581003 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
CBX1-206ENST00000581003 ALDH1L1O75891 902 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 EGFRP00533 1210 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
CBX1-206ENST00000581003 TRPM4Q8TD43 1214 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 EYA3Q99504 573 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 TNNQ9UQP3 1299 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 PTPRCP08575 1304 aa15.94■□□□□ 0.14
CBX1-206ENST00000581003 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 IGHMBP2P38935 993 aaKnown RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 HIRAP54198 1017 aaPredicted RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 ALDH1L2Q3SY69 923 aa15.93■□□□□ 0.14
CBX1-206ENST00000581003 HELBQ8NG08 1087 aaPredicted RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
CBX1-206ENST00000581003 PASKQ96RG2 1323 aa15.93■□□□□ 0.14
CBX1-206ENST00000581003 ZNF646O15015 1829 aaPredicted RBP15.92■□□□□ 0.14
CBX1-206ENST00000581003 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 TRAF5O00463 557 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 TAF5LO75529 589 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 CCT4P50991 539 aaKnown RBP15.92■□□□□ 0.14
CBX1-206ENST00000581003 RARSP54136 660 aaKnown RBP15.92■□□□□ 0.14
CBX1-206ENST00000581003 CHRNDQ07001 517 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 MXD3Q9BW11 206 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 BICC1Q9H694 974 aaKnown RBP15.92■□□□□ 0.14
CBX1-206ENST00000581003 UTYO14607 1347 aa15.92■□□□□ 0.14
CBX1-206ENST00000581003 ATP2B4P23634 1241 aa15.91■□□□□ 0.14
CBX1-206ENST00000581003 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
CBX1-206ENST00000581003 TNIP1Q15025 636 aa15.91■□□□□ 0.14
CBX1-206ENST00000581003 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
CBX1-206ENST00000581003 PNMA8AQ86V59 439 aaPredicted RBP15.91■□□□□ 0.14
CBX1-206ENST00000581003 CNTROBQ8N137 903 aa15.91■□□□□ 0.14
CBX1-206ENST00000581003 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
CBX1-206ENST00000581003 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
CBX1-206ENST00000581003 SAMD7Q7Z3H4 446 aa15.9■□□□□ 0.14
CBX1-206ENST00000581003 MPHOSPH8Q99549 860 aa15.9■□□□□ 0.14
CBX1-206ENST00000581003 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
CBX1-206ENST00000581003 ADARB2Q9NS39 739 aaKnown RBP15.9■□□□□ 0.14
CBX1-206ENST00000581003 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
CBX1-206ENST00000581003 IRS2Q9Y4H2 1338 aa15.9■□□□□ 0.14
CBX1-206ENST00000581003 TBC1D10BQ4KMP7 808 aaPredicted RBP15.89■□□□□ 0.13
CBX1-206ENST00000581003 USP50Q70EL3 339 aaPredicted RBP15.89■□□□□ 0.13
CBX1-206ENST00000581003 KLHDC4Q8TBB5 520 aa15.89■□□□□ 0.13
CBX1-206ENST00000581003 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
CBX1-206ENST00000581003 ZNF804BA4D1E1 1349 aa15.89■□□□□ 0.13
CBX1-206ENST00000581003 ASTN2O75129 1339 aaPredicted RBP15.89■□□□□ 0.13
CBX1-206ENST00000581003 G3V3G9 751 aa15.88■□□□□ 0.13
CBX1-206ENST00000581003 BCAR3O75815 825 aa15.88■□□□□ 0.13
CBX1-206ENST00000581003 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
CBX1-206ENST00000581003 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
CBX1-206ENST00000581003 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
CBX1-206ENST00000581003 PSME4Q14997 1843 aa15.87■□□□□ 0.13
CBX1-206ENST00000581003 PLIN1O60240 522 aa15.87■□□□□ 0.13
CBX1-206ENST00000581003 VIL1P09327 827 aaKnown RBP15.87■□□□□ 0.13
CBX1-206ENST00000581003 RABL6Q3YEC7 729 aaPredicted RBP15.87■□□□□ 0.13
CBX1-206ENST00000581003 RBM26Q5T8P6 1007 aaKnown RBP15.87■□□□□ 0.13
CBX1-206ENST00000581003 GLIS2Q9BZE0 524 aaPredicted RBP15.87■□□□□ 0.13
CBX1-206ENST00000581003 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
CBX1-206ENST00000581003 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
CBX1-206ENST00000581003 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms