RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 FMR1Q06787 632 aaKnown RBP eCLIP27.21■■□□□ 1.95
CSNK1D-215ENST00000580784 GCKRQ14397 625 aa27.21■■□□□ 1.95
CSNK1D-215ENST00000580784 KCNQ5Q9NR82 932 aa27.21■■□□□ 1.95
CSNK1D-215ENST00000580784 ZC3H12CQ9C0D7 883 aaKnown RBP27.2■■□□□ 1.94
CSNK1D-215ENST00000580784 GREM2Q9H772 168 aa27.2■■□□□ 1.94
CSNK1D-215ENST00000580784 ZBTB12Q9Y330 459 aaPredicted RBP27.2■■□□□ 1.94
CSNK1D-215ENST00000580784 SPEF2Q9C093 1822 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 SHTN1A0MZ66 631 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 PSMD14O00487 310 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 ECE2O60344 883 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 UFL1O94874 794 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 CNOT7Q9UIV1 285 aaKnown RBP27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 GGA1Q9UJY5 639 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 CNTNAP1P78357 1384 aa27.19■■□□□ 1.94
CSNK1D-215ENST00000580784 LINS1Q8NG48 757 aa27.18■■□□□ 1.94
CSNK1D-215ENST00000580784 CDC5LQ99459 802 aaKnown RBP27.18■■□□□ 1.94
CSNK1D-215ENST00000580784 HIRAP54198 1017 aaPredicted RBP27.17■■□□□ 1.94
CSNK1D-215ENST00000580784 SCN9AQ15858 1988 aa27.17■■□□□ 1.94
CSNK1D-215ENST00000580784 F6X3S4 739 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 TRAF5O00463 557 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 CASP7P55210 303 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 IFFO2Q5TF58 517 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 RTL9Q8NET4 1388 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 XDHP47989 1333 aa27.16■■□□□ 1.94
CSNK1D-215ENST00000580784 TRPM7Q96QT4 1865 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 H7C1D1 291 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 HSPA1AP0DMV8 641 aaKnown RBP27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 HSPA1BP0DMV9 641 aaKnown RBP27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 MICALL2Q8IY33 904 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 TRPM4Q8TD43 1214 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 DPF2Q92785 391 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 ZNF521Q96K83 1311 aa27.15■■□□□ 1.94
CSNK1D-215ENST00000580784 WTIPA6NIX2 430 aaPredicted RBP27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 G3V3G9 751 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 VEGFBP49765 207 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 DCAF8Q5TAQ9 597 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 PLA2G12BQ9BX93 195 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 BSDC1Q9NW68 430 aaPredicted RBP27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 PGAP2Q9UHJ9 254 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 MINPP1Q9UNW1 487 aa27.14■■□□□ 1.94
CSNK1D-215ENST00000580784 ATP2B4P23634 1241 aa27.12■■□□□ 1.93
CSNK1D-215ENST00000580784 DEFB115Q30KQ5 88 aa27.12■■□□□ 1.93
CSNK1D-215ENST00000580784 CST9Q5W186 159 aa27.12■■□□□ 1.93
CSNK1D-215ENST00000580784 ABT1Q9ULW3 272 aaKnown RBP27.12■■□□□ 1.93
CSNK1D-215ENST00000580784 RASSF10A6NK89 507 aa27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 CSF1RP07333 972 aa27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 BEND3Q5T5X7 828 aa27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 SAMD7Q7Z3H4 446 aa27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 ZC3H15Q8WU90 426 aaKnown RBP27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 GLIS2Q9BZE0 524 aaPredicted RBP27.11■■□□□ 1.93
CSNK1D-215ENST00000580784 VIL1P09327 827 aaKnown RBP27.1■■□□□ 1.93
CSNK1D-215ENST00000580784 ITGA6P23229 1130 aa27.1■■□□□ 1.93
CSNK1D-215ENST00000580784 RPS12P25398 132 aaKnown RBP27.1■■□□□ 1.93
CSNK1D-215ENST00000580784 COL13A1Q5TAT6 717 aaPredicted RBP27.1■■□□□ 1.93
CSNK1D-215ENST00000580784 POLR2AP24928 1970 aaKnown RBP27.09■■□□□ 1.93
CSNK1D-215ENST00000580784 FAM161AQ3B820 660 aa27.09■■□□□ 1.93
CSNK1D-215ENST00000580784 EGFRP00533 1210 aa27.08■■□□□ 1.93
CSNK1D-215ENST00000580784 IGHMBP2P38935 993 aaKnown RBP27.08■■□□□ 1.93
CSNK1D-215ENST00000580784 TBC1D10BQ4KMP7 808 aaPredicted RBP27.08■■□□□ 1.93
CSNK1D-215ENST00000580784 PSME4Q14997 1843 aa27.07■■□□□ 1.92
CSNK1D-215ENST00000580784 CCT4P50991 539 aaKnown RBP27.07■■□□□ 1.92
CSNK1D-215ENST00000580784 RBM26Q5T8P6 1007 aaKnown RBP27.07■■□□□ 1.92
CSNK1D-215ENST00000580784 FOXO4P98177 505 aa27.06■■□□□ 1.92
CSNK1D-215ENST00000580784 CDC37L1Q7L3B6 337 aa27.06■■□□□ 1.92
CSNK1D-215ENST00000580784 CELF2O95319 508 aaKnown RBP27.04■■□□□ 1.92
CSNK1D-215ENST00000580784 SLC4A10Q6U841 1118 aa27.04■■□□□ 1.92
CSNK1D-215ENST00000580784 PODNQ7Z5L7 613 aa27.04■■□□□ 1.92
CSNK1D-215ENST00000580784 MPHOSPH8Q99549 860 aa27.04■■□□□ 1.92
CSNK1D-215ENST00000580784 WDR33Q9C0J8 1336 aaKnown RBP27.04■■□□□ 1.92
CSNK1D-215ENST00000580784 RSBN1LQ6PCB5 846 aaPredicted RBP27.03■■□□□ 1.92
CSNK1D-215ENST00000580784 USP48Q86UV5 1035 aa27.03■■□□□ 1.92
CSNK1D-215ENST00000580784 MED23Q9ULK4 1368 aa27.03■■□□□ 1.92
CSNK1D-215ENST00000580784 ANKRD18BA2A2Z9 1011 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 GRM8O00222 908 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 DLK2Q6UY11 383 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 TXNRD3Q86VQ6 643 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 ZNF408Q9H9D4 720 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 LEMD3Q9Y2U8 911 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 TLL2Q9Y6L7 1015 aa27.02■■□□□ 1.92
CSNK1D-215ENST00000580784 USP17L3A6NCW0 530 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 USP17L4A6NCW7 530 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 E9PSI1 815 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 EPHA10Q5JZY3 1008 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 PAXIP1Q6ZW49 1069 aaPredicted RBP27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 USP17L1Q7RTZ2 530 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 AGBL3Q8NEM8 1001 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 ANKRD2Q9GZV1 360 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 CHMP3Q9Y3E7 222 aa27.01■■□□□ 1.91
CSNK1D-215ENST00000580784 KIF4BQ2VIQ3 1234 aa27■■□□□ 1.91
CSNK1D-215ENST00000580784 LMBR1LQ6UX01 489 aa27■■□□□ 1.91
CSNK1D-215ENST00000580784 MRPL50Q8N5N7 158 aaKnown RBP27■■□□□ 1.91
CSNK1D-215ENST00000580784 GMLQ99445 158 aa27■■□□□ 1.91
CSNK1D-215ENST00000580784 SRCIN1Q9C0H9 1055 aa27■■□□□ 1.91
CSNK1D-215ENST00000580784 C9orf78Q9NZ63 289 aaPredicted RBP27■■□□□ 1.91
CSNK1D-215ENST00000580784 ZNF804BA4D1E1 1349 aa26.99■■□□□ 1.91
CSNK1D-215ENST00000580784 FOXN1O15353 648 aa26.99■■□□□ 1.91
CSNK1D-215ENST00000580784 ALDH1L1O75891 902 aa26.99■■□□□ 1.91
CSNK1D-215ENST00000580784 CHRNDQ07001 517 aa26.99■■□□□ 1.91
CSNK1D-215ENST00000580784 SLFN5Q08AF3 891 aa26.99■■□□□ 1.91
CSNK1D-215ENST00000580784 GRM1Q13255 1194 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms