RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 MYH3P11055 1940 aa21.07■□□□□ 0.96
SREBF1-219ENST00000580540 DUOX1Q9NRD9 1551 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 SCN4AP35499 1836 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 GRM8O00222 908 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 ALDH1L1O75891 902 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 ITGA6P23229 1130 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 HTRA3P83110 453 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 PODXL2Q9NZ53 605 aa21.06■□□□□ 0.96
SREBF1-219ENST00000580540 YDJCA8MPS7 323 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 EPS15P42566 896 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 TNIP1Q15025 636 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 LDHDQ86WU2 507 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 MPHOSPH8Q99549 860 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 BSDC1Q9NW68 430 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-219ENST00000580540 RTL9Q8NET4 1388 aa21.05■□□□□ 0.96
SREBF1-219ENST00000580540 XDHP47989 1333 aa21.04■□□□□ 0.96
SREBF1-219ENST00000580540 CSF1RP07333 972 aa21.04■□□□□ 0.96
SREBF1-219ENST00000580540 SCNN1DP51172 638 aa21.04■□□□□ 0.96
SREBF1-219ENST00000580540 HNRNPUQ00839 825 aaKnown RBP eCLIP21.04■□□□□ 0.96
SREBF1-219ENST00000580540 ALDH1L2Q3SY69 923 aa21.04■□□□□ 0.96
SREBF1-219ENST00000580540 PNMA8AQ86V59 439 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-219ENST00000580540 PTPRCP08575 1304 aa21.04■□□□□ 0.96
SREBF1-219ENST00000580540 ANKRD18BA2A2Z9 1011 aa21.03■□□□□ 0.96
SREBF1-219ENST00000580540 ECE2O60344 883 aa21.03■□□□□ 0.96
SREBF1-219ENST00000580540 GMPSP49915 693 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-219ENST00000580540 FOXO4P98177 505 aa21.03■□□□□ 0.96
SREBF1-219ENST00000580540 MINPP1Q9UNW1 487 aa21.03■□□□□ 0.96
SREBF1-219ENST00000580540 ATP2B4P23634 1241 aa21.02■□□□□ 0.96
SREBF1-219ENST00000580540 IFIT5Q13325 482 aaKnown RBP21.02■□□□□ 0.96
SREBF1-219ENST00000580540 EPHA10Q5JZY3 1008 aa21.02■□□□□ 0.96
SREBF1-219ENST00000580540 LMBR1LQ6UX01 489 aa21.02■□□□□ 0.96
SREBF1-219ENST00000580540 SPEF2Q9C093 1822 aa21.01■□□□□ 0.95
SREBF1-219ENST00000580540 CT47B1P0C2W7 299 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-219ENST00000580540 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
SREBF1-219ENST00000580540 GPRC5DQ9NZD1 345 aa21.01■□□□□ 0.95
SREBF1-219ENST00000580540 WTIPA6NIX2 430 aaPredicted RBP21■□□□□ 0.95
SREBF1-219ENST00000580540 PSMD14O00487 310 aa21■□□□□ 0.95
SREBF1-219ENST00000580540 TAF7LQ5H9L4 462 aa21■□□□□ 0.95
SREBF1-219ENST00000580540 MAP1SQ66K74 1059 aaPredicted RBP21■□□□□ 0.95
SREBF1-219ENST00000580540 ZBTB12Q9Y330 459 aaPredicted RBP21■□□□□ 0.95
SREBF1-219ENST00000580540 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-219ENST00000580540 CCT4P50991 539 aaKnown RBP20.99■□□□□ 0.95
SREBF1-219ENST00000580540 SUCLG2Q96I99 432 aa20.99■□□□□ 0.95
SREBF1-219ENST00000580540 NOB1Q9ULX3 412 aaKnown RBP20.99■□□□□ 0.95
SREBF1-219ENST00000580540 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
SREBF1-219ENST00000580540 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
SREBF1-219ENST00000580540 CCDC57Q2TAC2 916 aa20.98■□□□□ 0.95
SREBF1-219ENST00000580540 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
SREBF1-219ENST00000580540 ADARB2Q9NS39 739 aaKnown RBP20.98■□□□□ 0.95
SREBF1-219ENST00000580540 KCNJ4P48050 445 aa20.97■□□□□ 0.95
SREBF1-219ENST00000580540 USP50Q70EL3 339 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-219ENST00000580540 CNTROBQ8N137 903 aa20.97■□□□□ 0.95
SREBF1-219ENST00000580540 ZNF594Q96JF6 807 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-219ENST00000580540 CNOT7Q9UIV1 285 aaKnown RBP20.97■□□□□ 0.95
SREBF1-219ENST00000580540 SHTN1A0MZ66 631 aa20.96■□□□□ 0.95
SREBF1-219ENST00000580540 H7C1D1 291 aa20.96■□□□□ 0.95
SREBF1-219ENST00000580540 CHRNDQ07001 517 aa20.96■□□□□ 0.95
SREBF1-219ENST00000580540 HELBQ8NG08 1087 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-219ENST00000580540 LEMD3Q9Y2U8 911 aa20.96■□□□□ 0.95
SREBF1-219ENST00000580540 RARSP54136 660 aaKnown RBP20.95■□□□□ 0.94
SREBF1-219ENST00000580540 MICALL2Q8IY33 904 aa20.95■□□□□ 0.94
SREBF1-219ENST00000580540 DNAJC5GQ8N7S2 189 aa20.95■□□□□ 0.94
SREBF1-219ENST00000580540 PLIN1O60240 522 aa20.94■□□□□ 0.94
SREBF1-219ENST00000580540 TAF5LO75529 589 aa20.94■□□□□ 0.94
SREBF1-219ENST00000580540 ITGBL1O95965 494 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-219ENST00000580540 CNNM1Q9NRU3 951 aa20.94■□□□□ 0.94
SREBF1-219ENST00000580540 ZNF804BA4D1E1 1349 aa20.94■□□□□ 0.94
SREBF1-219ENST00000580540 RBM26Q5T8P6 1007 aaKnown RBP20.93■□□□□ 0.94
SREBF1-219ENST00000580540 LDHAL6AQ6ZMR3 332 aa20.93■□□□□ 0.94
SREBF1-219ENST00000580540 FBXW7Q969H0 707 aa20.93■□□□□ 0.94
SREBF1-219ENST00000580540 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
SREBF1-219ENST00000580540 API5Q9BZZ5 524 aaKnown RBP20.93■□□□□ 0.94
SREBF1-219ENST00000580540 BICC1Q9H694 974 aaKnown RBP20.93■□□□□ 0.94
SREBF1-219ENST00000580540 UTYO14607 1347 aa20.93■□□□□ 0.94
SREBF1-219ENST00000580540 MED23Q9ULK4 1368 aa20.93■□□□□ 0.94
SREBF1-219ENST00000580540 VIL1P09327 827 aaKnown RBP20.92■□□□□ 0.94
SREBF1-219ENST00000580540 PODNQ7Z5L7 613 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 TRPM4Q8TD43 1214 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 DPF2Q92785 391 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 KLRG1Q96E93 195 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 USP44Q9H0E7 712 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 PASKQ96RG2 1323 aa20.92■□□□□ 0.94
SREBF1-219ENST00000580540 SNAP23O00161 211 aa20.91■□□□□ 0.94
SREBF1-219ENST00000580540 RPS12P25398 132 aaKnown RBP20.91■□□□□ 0.94
SREBF1-219ENST00000580540 KLRK1P26718 216 aa20.91■□□□□ 0.94
SREBF1-219ENST00000580540 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
SREBF1-219ENST00000580540 TXNRD3Q86VQ6 643 aa20.91■□□□□ 0.94
SREBF1-219ENST00000580540 ADAMTSL1Q8N6G6 1762 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 USP17L3A6NCW0 530 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 USP17L4A6NCW7 530 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 BRPF1P55201 1214 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-219ENST00000580540 TBC1D10BQ4KMP7 808 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-219ENST00000580540 USP17L1Q7RTZ2 530 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 SCN9AQ15858 1988 aa20.9■□□□□ 0.94
SREBF1-219ENST00000580540 HIRAP54198 1017 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-219ENST00000580540 RSBN1LQ6PCB5 846 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-219ENST00000580540 ANKRD44Q8N8A2 993 aa20.89■□□□□ 0.93
SREBF1-219ENST00000580540 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms