RNA–Protein interactions for RNA: ENST00000579638.5

PPP4R1-214, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-214ENST00000579638 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
PPP4R1-214ENST00000579638 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-214ENST00000579638 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
PPP4R1-214ENST00000579638 AEBP1Q8IUX7 1158 aa9.37□□□□□ -0.91
PPP4R1-214ENST00000579638 ZNF277Q9NRM2 450 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-214ENST00000579638 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 FZD9O00144 591 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 TRAF5O00463 557 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 ST18O60284 1047 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 SOX10P56693 466 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
PPP4R1-214ENST00000579638 SMAPO00193 183 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 CA12O43570 354 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 TNNT2P45379 298 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 EMP3P54852 163 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 GPC2Q8N158 579 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
PPP4R1-214ENST00000579638 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
PPP4R1-214ENST00000579638 CNBD1Q8NA66 436 aa9.34□□□□□ -0.91
PPP4R1-214ENST00000579638 TMEM134Q9H6X4 195 aa9.34□□□□□ -0.91
PPP4R1-214ENST00000579638 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
PPP4R1-214ENST00000579638 A0A087WZG4 1122 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 EPS15P42566 896 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 CIAPIN1Q6FI81 312 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 SAPCD2Q86UD0 394 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 MRC1P22897 1456 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
PPP4R1-214ENST00000579638 COL4A5P29400 1685 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 CD46P15529 392 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 PBX2P40425 430 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 SCNN1DP51172 638 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 ST5P78524 1137 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 MYSM1Q5VVJ2 828 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 POTEEQ6S8J3 1075 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 SYNE4Q8N205 404 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 ZIC5Q96T25 663 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 KNSTRNQ9Y448 316 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 BCORQ6W2J9 1755 aa9.32□□□□□ -0.92
PPP4R1-214ENST00000579638 NPHP1O15259 732 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 RNMTO43148 476 aaKnown RBP9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 CAMTA2O94983 1202 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 NPR1P16066 1061 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
PPP4R1-214ENST00000579638 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 KLRG2A4D1S0 409 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 FAM205CA6NFA0 338 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 CELF2O95319 508 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 STARD3NLO95772 234 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 USP50Q70EL3 339 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 PRKRIP1Q9H875 184 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 SNED1Q8TER0 1413 aa9.3□□□□□ -0.92
PPP4R1-214ENST00000579638 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-214ENST00000579638 CCDC184Q52MB2 194 aa9.29□□□□□ -0.92
PPP4R1-214ENST00000579638 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-214ENST00000579638 JDP2Q8WYK2 163 aa9.29□□□□□ -0.92
PPP4R1-214ENST00000579638 FAM163AQ96GL9 167 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-214ENST00000579638 IL6STP40189 918 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 FLIIQ13045 1269 aa9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 PSMD1Q99460 953 aa9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 GLIS2Q9BZE0 524 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-214ENST00000579638 EIF5BO60841 1220 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-214ENST00000579638 A1BGP04217 495 aa9.27□□□□□ -0.93
PPP4R1-214ENST00000579638 PPP2R1AP30153 589 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms