RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 CNOT7Q9UIV1 285 aaKnown RBP29.21■■■□□ 2.27
CDKN2A-212ENST00000578845 MYH3P11055 1940 aa29.2■■■□□ 2.27
CDKN2A-212ENST00000578845 VEGFBP49765 207 aa29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 EXOSC9Q06265 439 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 CDC5LQ99459 802 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 SPINK5Q9NQ38 1064 aaPredicted RBP29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 ANKIB1Q9P2G1 1089 aa29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 GGA1Q9UJY5 639 aa29.2■■■□□ 2.26
CDKN2A-212ENST00000578845 UFL1O94874 794 aa29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 RPS12P25398 132 aaKnown RBP29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 HIRAP54198 1017 aaPredicted RBP29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 COL13A1Q5TAT6 717 aaPredicted RBP29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 DNAAF4Q8WXU2 420 aa29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 GPR101Q96P66 508 aaPredicted RBP29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 ZC3H12CQ9C0D7 883 aaKnown RBP29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 XDHP47989 1333 aa29.19■■■□□ 2.26
CDKN2A-212ENST00000578845 FKBP5Q13451 457 aaPredicted RBP29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 GCKRQ14397 625 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 DOK7Q18PE1 504 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 MICALL2Q8IY33 904 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 FAM9BQ8IZU0 186 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 TRPM4Q8TD43 1214 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 PLA2G12BQ9BX93 195 aa29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 ZBTB12Q9Y330 459 aaPredicted RBP29.18■■■□□ 2.26
CDKN2A-212ENST00000578845 H7C1D1 291 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 FMR1Q06787 632 aaKnown RBP eCLIP29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 DEFB115Q30KQ5 88 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 UBE3BQ7Z3V4 1068 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 LINS1Q8NG48 757 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 GREM2Q9H772 168 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 ZNF609O15014 1411 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 TRPM7Q96QT4 1865 aa29.17■■■□□ 2.26
CDKN2A-212ENST00000578845 SHTN1A0MZ66 631 aa29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 TRAF5O00463 557 aa29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 CASP7P55210 303 aa29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 MYH16Q9H6N6 1097 aa29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 KCNQ5Q9NR82 932 aa29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 BSDC1Q9NW68 430 aaPredicted RBP29.16■■■□□ 2.26
CDKN2A-212ENST00000578845 CST9Q5W186 159 aa29.15■■■□□ 2.26
CDKN2A-212ENST00000578845 SCN9AQ15858 1988 aa29.15■■■□□ 2.26
CDKN2A-212ENST00000578845 VIL1P09327 827 aaKnown RBP29.14■■■□□ 2.26
CDKN2A-212ENST00000578845 ATP2B4P23634 1241 aa29.14■■■□□ 2.26
CDKN2A-212ENST00000578845 ABT1Q9ULW3 272 aaKnown RBP29.14■■■□□ 2.26
CDKN2A-212ENST00000578845 ZNF521Q96K83 1311 aa29.13■■■□□ 2.25
CDKN2A-212ENST00000578845 GLIS2Q9BZE0 524 aaPredicted RBP29.12■■■□□ 2.25
CDKN2A-212ENST00000578845 MINPP1Q9UNW1 487 aa29.12■■■□□ 2.25
CDKN2A-212ENST00000578845 THSD7BQ9C0I4 1608 aa29.12■■■□□ 2.25
CDKN2A-212ENST00000578845 CSF1RP07333 972 aa29.11■■■□□ 2.25
CDKN2A-212ENST00000578845 TLL2Q9Y6L7 1015 aa29.11■■■□□ 2.25
CDKN2A-212ENST00000578845 CDC37L1Q7L3B6 337 aa29.1■■■□□ 2.25
CDKN2A-212ENST00000578845 WDR33Q9C0J8 1336 aaKnown RBP29.1■■■□□ 2.25
CDKN2A-212ENST00000578845 PSME4Q14997 1843 aa29.1■■■□□ 2.25
CDKN2A-212ENST00000578845 MED23Q9ULK4 1368 aa29.1■■■□□ 2.25
CDKN2A-212ENST00000578845 SAMD7Q7Z3H4 446 aa29.09■■■□□ 2.25
CDKN2A-212ENST00000578845 WBP1LQ9NX94 342 aa29.09■■■□□ 2.25
CDKN2A-212ENST00000578845 G3V3G9 751 aa29.08■■■□□ 2.25
CDKN2A-212ENST00000578845 EGFRP00533 1210 aa29.08■■■□□ 2.25
CDKN2A-212ENST00000578845 BEND3Q5T5X7 828 aa29.08■■■□□ 2.25
CDKN2A-212ENST00000578845 DCAF8Q5TAQ9 597 aa29.08■■■□□ 2.25
CDKN2A-212ENST00000578845 CELF2O95319 508 aaKnown RBP29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 ITGA6P23229 1130 aa29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 TBC1D10BQ4KMP7 808 aaPredicted RBP29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 PODNQ7Z5L7 613 aa29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 AGBL3Q8NEM8 1001 aa29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 SPEF2Q9C093 1822 aa29.07■■■□□ 2.24
CDKN2A-212ENST00000578845 FOXN1O15353 648 aa29.06■■■□□ 2.24
CDKN2A-212ENST00000578845 IGHMBP2P38935 993 aaKnown RBP29.06■■■□□ 2.24
CDKN2A-212ENST00000578845 CCT4P50991 539 aaKnown RBP29.06■■■□□ 2.24
CDKN2A-212ENST00000578845 FAM161AQ3B820 660 aa29.06■■■□□ 2.24
CDKN2A-212ENST00000578845 RSBN1LQ6PCB5 846 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-212ENST00000578845 WTIPA6NIX2 430 aaPredicted RBP29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 F6X3S4 739 aa29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 ECE1P42892 770 aa29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 SAPCD2Q86UD0 394 aa29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 HHIPL1Q96JK4 782 aa29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 CAPNS2Q96L46 248 aa29.05■■■□□ 2.24
CDKN2A-212ENST00000578845 ZNF280AP59817 542 aaPredicted RBP29.04■■■□□ 2.24
CDKN2A-212ENST00000578845 GMLQ99445 158 aa29.04■■■□□ 2.24
CDKN2A-212ENST00000578845 LEMD3Q9Y2U8 911 aa29.04■■■□□ 2.24
CDKN2A-212ENST00000578845 KIF4BQ2VIQ3 1234 aa29.03■■■□□ 2.24
CDKN2A-212ENST00000578845 TNS4Q8IZW8 715 aa29.03■■■□□ 2.24
CDKN2A-212ENST00000578845 AIDAQ96BJ3 306 aa29.03■■■□□ 2.24
CDKN2A-212ENST00000578845 MAP2K1Q02750 393 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-212ENST00000578845 USP17L3A6NCW0 530 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 USP17L4A6NCW7 530 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 CTCFP49711 727 aaPredicted RBP29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 FOXO4P98177 505 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 CYP4F22Q6NT55 531 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 USP17L1Q7RTZ2 530 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 USP48Q86UV5 1035 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 ANKRD2Q9GZV1 360 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 PRDM10Q9NQV6 1147 aa29.01■■■□□ 2.23
CDKN2A-212ENST00000578845 KRT26Q7Z3Y9 468 aa29■■■□□ 2.23
CDKN2A-212ENST00000578845 MPHOSPH8Q99549 860 aa29■■■□□ 2.23
CDKN2A-212ENST00000578845 ZNF646O15015 1829 aaPredicted RBP28.99■■■□□ 2.23
CDKN2A-212ENST00000578845 DCPSQ96C86 337 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-212ENST00000578845 COA1Q9GZY4 146 aa28.99■■■□□ 2.23
CDKN2A-212ENST00000578845 ZNF804BA4D1E1 1349 aa28.98■■■□□ 2.23
CDKN2A-212ENST00000578845 ANKRD18BA2A2Z9 1011 aa28.98■■■□□ 2.23
CDKN2A-212ENST00000578845 RBM26Q5T8P6 1007 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms