RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 LDHDQ86WU2 507 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 ZNF622Q969S3 477 aaKnown RBP eCLIP9.5□□□□□ -0.891e-6■□□□□ 8.9
CNOT1-218ENST00000569732 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-218ENST00000569732 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 ANKRD31Q8N7Z5 1873 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 COL11A2P13942 1736 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-218ENST00000569732 PASKQ96RG2 1323 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
CNOT1-218ENST00000569732 SCN4AP35499 1836 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 RNMTO43148 476 aaKnown RBP9.49□□□□□ -0.89
CNOT1-218ENST00000569732 ST18O60284 1047 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 LILRB3O75022 631 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 STARD3NLO95772 234 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 IL13P35225 146 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 PBX2P40425 430 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 EMP3P54852 163 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 SLC39A6Q13433 755 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 CNGB1Q14028 1251 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-218ENST00000569732 RALBP1Q15311 655 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 CNKSR1Q969H4 720 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 POM121Q96HA1 1249 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 ARID3AQ99856 593 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 LGR6Q9HBX8 967 aa9.49□□□□□ -0.89
CNOT1-218ENST00000569732 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
CNOT1-218ENST00000569732 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-218ENST00000569732 SLC10A3P09131 477 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 EIF5P55010 431 aaKnown RBP9.48□□□□□ -0.89
CNOT1-218ENST00000569732 QPCTQ16769 361 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 PRR5LQ6MZQ0 368 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 BICDL1Q6ZP65 573 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 TEX13AQ9BXU3 409 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-218ENST00000569732 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
CNOT1-218ENST00000569732 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
CNOT1-218ENST00000569732 PRPF38BQ5VTL8 546 aaKnown RBP9.47□□□□□ -0.89
CNOT1-218ENST00000569732 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
CNOT1-218ENST00000569732 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
CNOT1-218ENST00000569732 TTC5Q8N0Z6 440 aa9.47□□□□□ -0.89
CNOT1-218ENST00000569732 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
CNOT1-218ENST00000569732 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
CNOT1-218ENST00000569732 MYBBP1AQ9BQG0 1328 aaKnown RBP9.47□□□□□ -0.89
CNOT1-218ENST00000569732 ADAMTSL1Q8N6G6 1762 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 HOXA2O43364 376 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 SRGNP10124 158 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
CNOT1-218ENST00000569732 VEGFBP49765 207 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 ST5P78524 1137 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.9
CNOT1-218ENST00000569732 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
CNOT1-218ENST00000569732 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
CNOT1-218ENST00000569732 CNBD1Q8NA66 436 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 MASTLQ96GX5 879 aa9.46□□□□□ -0.9
CNOT1-218ENST00000569732 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.9
CNOT1-218ENST00000569732 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 CACNA1SQ13698 1873 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 RASSF10A6NK89 507 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 NPHP1O15259 732 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 AP1G2O75843 785 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
CNOT1-218ENST00000569732 FDX1P10109 184 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 MAP2K1Q02750 393 aaPredicted RBP9.45□□□□□ -0.9
CNOT1-218ENST00000569732 PNMA8AQ86V59 439 aaPredicted RBP9.45□□□□□ -0.9
CNOT1-218ENST00000569732 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 MARVELD3Q96A59 401 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 SETDB2Q96T68 719 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 HEG1Q9ULI3 1381 aa9.45□□□□□ -0.9
CNOT1-218ENST00000569732 LBX1P52954 281 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
CNOT1-218ENST00000569732 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 CCDC93Q567U6 631 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 LAPTM4BQ86VI4 370 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 SLX4Q8IY92 1834 aa9.44□□□□□ -0.9
CNOT1-218ENST00000569732 THSD7BQ9C0I4 1608 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 EPHX2P34913 555 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
CNOT1-218ENST00000569732 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
CNOT1-218ENST00000569732 ZNF790Q6PG37 636 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 ABHD8Q96I13 439 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
CNOT1-218ENST00000569732 ZNF330Q9Y3S2 320 aaPredicted RBP9.43□□□□□ -0.9
CNOT1-218ENST00000569732 SIPA1L3O60292 1781 aaPredicted RBP9.42□□□□□ -0.9
CNOT1-218ENST00000569732 WDR33Q9C0J8 1336 aaKnown RBP9.42□□□□□ -0.9
CNOT1-218ENST00000569732 ANP32CO43423 234 aa9.42□□□□□ -0.9
CNOT1-218ENST00000569732 DIAPH1O60610 1272 aaKnown RBP9.42□□□□□ -0.9
CNOT1-218ENST00000569732 CAMTA2O94983 1202 aa9.42□□□□□ -0.9
CNOT1-218ENST00000569732 HMOX1P09601 288 aa9.42□□□□□ -0.9
CNOT1-218ENST00000569732 HSPA8P11142 646 aaKnown RBP9.42□□□□□ -0.9
CNOT1-218ENST00000569732 NPR1P16066 1061 aa9.42□□□□□ -0.9
CNOT1-218ENST00000569732 TEFQ10587 303 aa9.42□□□□□ -0.9
CNOT1-218ENST00000569732 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms