RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 DOK7Q18PE1 504 aa25.6■■□□□ 1.69
ABCA3-206ENST00000569062 SLC4A10Q6U841 1118 aa25.6■■□□□ 1.69
ABCA3-206ENST00000569062 CSF1RP07333 972 aa25.59■■□□□ 1.69
ABCA3-206ENST00000569062 GMPSP49915 693 aaPredicted RBP25.59■■□□□ 1.69
ABCA3-206ENST00000569062 FAM161AQ3B820 660 aa25.59■■□□□ 1.69
ABCA3-206ENST00000569062 BSDC1Q9NW68 430 aaPredicted RBP25.59■■□□□ 1.69
ABCA3-206ENST00000569062 GPRC5DQ9NZD1 345 aa25.59■■□□□ 1.69
ABCA3-206ENST00000569062 GGA1Q9UJY5 639 aa25.59■■□□□ 1.69
ABCA3-206ENST00000569062 ITGA6P23229 1130 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 TNIP1Q15025 636 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 DIEXFQ68CQ4 756 aaKnown RBP25.58■■□□□ 1.69
ABCA3-206ENST00000569062 TRMT2AQ8IZ69 625 aaKnown RBP25.58■■□□□ 1.69
ABCA3-206ENST00000569062 MIER1Q8N108 512 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 SSH1Q8WYL5 1049 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 ZC3H12CQ9C0D7 883 aaKnown RBP25.58■■□□□ 1.69
ABCA3-206ENST00000569062 SCN9AQ15858 1988 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 XDHP47989 1333 aa25.58■■□□□ 1.69
ABCA3-206ENST00000569062 ECE2O60344 883 aa25.57■■□□□ 1.68
ABCA3-206ENST00000569062 ITGBL1O95965 494 aaPredicted RBP25.57■■□□□ 1.68
ABCA3-206ENST00000569062 MAP1SQ66K74 1059 aaPredicted RBP25.57■■□□□ 1.68
ABCA3-206ENST00000569062 KCNQ5Q9NR82 932 aa25.57■■□□□ 1.68
ABCA3-206ENST00000569062 MINPP1Q9UNW1 487 aa25.57■■□□□ 1.68
ABCA3-206ENST00000569062 PASKQ96RG2 1323 aa25.57■■□□□ 1.68
ABCA3-206ENST00000569062 WTIPA6NIX2 430 aaPredicted RBP25.56■■□□□ 1.68
ABCA3-206ENST00000569062 FOXO4P98177 505 aa25.56■■□□□ 1.68
ABCA3-206ENST00000569062 KLRG1Q96E93 195 aa25.56■■□□□ 1.68
ABCA3-206ENST00000569062 BCL2L13Q9BXK5 485 aa25.56■■□□□ 1.68
ABCA3-206ENST00000569062 GRM8O00222 908 aa25.55■■□□□ 1.68
ABCA3-206ENST00000569062 PSMD14O00487 310 aa25.55■■□□□ 1.68
ABCA3-206ENST00000569062 ALDH1L1O75891 902 aa25.55■■□□□ 1.68
ABCA3-206ENST00000569062 IGHMBP2P38935 993 aaKnown RBP25.55■■□□□ 1.68
ABCA3-206ENST00000569062 USP50Q70EL3 339 aaPredicted RBP25.55■■□□□ 1.68
ABCA3-206ENST00000569062 SRCIN1Q9C0H9 1055 aa25.55■■□□□ 1.68
ABCA3-206ENST00000569062 ADARB2Q9NS39 739 aaKnown RBP25.55■■□□□ 1.68
ABCA3-206ENST00000569062 ATP2B4P23634 1241 aa25.54■■□□□ 1.68
ABCA3-206ENST00000569062 EPHA10Q5JZY3 1008 aa25.54■■□□□ 1.68
ABCA3-206ENST00000569062 CNTROBQ8N137 903 aa25.54■■□□□ 1.68
ABCA3-206ENST00000569062 ZBTB12Q9Y330 459 aaPredicted RBP25.54■■□□□ 1.68
ABCA3-206ENST00000569062 SHTN1A0MZ66 631 aa25.53■■□□□ 1.68
ABCA3-206ENST00000569062 C9orf78Q9NZ63 289 aaPredicted RBP25.53■■□□□ 1.68
ABCA3-206ENST00000569062 PSME4Q14997 1843 aa25.52■■□□□ 1.68
ABCA3-206ENST00000569062 PTPRCP08575 1304 aa25.52■■□□□ 1.68
ABCA3-206ENST00000569062 ANKRD18BA2A2Z9 1011 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 G3V3G9 751 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 DCAF8Q5TAQ9 597 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 MPHOSPH8Q99549 860 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 CNOT7Q9UIV1 285 aaKnown RBP25.51■■□□□ 1.67
ABCA3-206ENST00000569062 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 A0A1B0GUL6 1792 aa25.51■■□□□ 1.67
ABCA3-206ENST00000569062 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
ABCA3-206ENST00000569062 ALDH1L2Q3SY69 923 aa25.5■■□□□ 1.67
ABCA3-206ENST00000569062 LMBR1LQ6UX01 489 aa25.5■■□□□ 1.67
ABCA3-206ENST00000569062 CREBZFQ9NS37 354 aa25.5■■□□□ 1.67
ABCA3-206ENST00000569062 MICALL2Q8IY33 904 aa25.49■■□□□ 1.67
ABCA3-206ENST00000569062 MED23Q9ULK4 1368 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 PCNTO95613 3336 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 NBPF7P0C2Y1 421 aaPredicted RBP25.48■■□□□ 1.67
ABCA3-206ENST00000569062 HIRAP54198 1017 aaPredicted RBP25.48■■□□□ 1.67
ABCA3-206ENST00000569062 IFIT5Q13325 482 aaKnown RBP25.48■■□□□ 1.67
ABCA3-206ENST00000569062 TRPM4Q8TD43 1214 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 DPF2Q92785 391 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 SUCLG2Q96I99 432 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 SMC4Q9NTJ3 1288 aa25.48■■□□□ 1.67
ABCA3-206ENST00000569062 FMR1Q06787 632 aaKnown RBP eCLIP25.47■■□□□ 1.67
ABCA3-206ENST00000569062 KAZALD1Q96I82 304 aa25.47■■□□□ 1.67
ABCA3-206ENST00000569062 UTYO14607 1347 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 H7C1D1 291 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 VIL1P09327 827 aaKnown RBP25.46■■□□□ 1.67
ABCA3-206ENST00000569062 CHRNDQ07001 517 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 JMYQ8N9B5 988 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 ANKRD2Q9GZV1 360 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 LEMD3Q9Y2U8 911 aa25.46■■□□□ 1.67
ABCA3-206ENST00000569062 ZNF646O15015 1829 aaPredicted RBP25.45■■□□□ 1.66
ABCA3-206ENST00000569062 TMEM88BA6NKF7 163 aa25.45■■□□□ 1.66
ABCA3-206ENST00000569062 CT47B1P0C2W7 299 aaPredicted RBP25.45■■□□□ 1.66
ABCA3-206ENST00000569062 RPS12P25398 132 aaKnown RBP25.45■■□□□ 1.66
ABCA3-206ENST00000569062 SAMD7Q7Z3H4 446 aa25.45■■□□□ 1.66
ABCA3-206ENST00000569062 TXNRD3Q86VQ6 643 aa25.45■■□□□ 1.66
ABCA3-206ENST00000569062 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
ABCA3-206ENST00000569062 TRPM7Q96QT4 1865 aa25.45■■□□□ 1.66
ABCA3-206ENST00000569062 ZNF804BA4D1E1 1349 aa25.44■■□□□ 1.66
ABCA3-206ENST00000569062 CCDC57Q2TAC2 916 aa25.44■■□□□ 1.66
ABCA3-206ENST00000569062 MKRN1Q9UHC7 482 aaKnown RBP25.44■■□□□ 1.66
ABCA3-206ENST00000569062 TRAF5O00463 557 aa25.43■■□□□ 1.66
ABCA3-206ENST00000569062 EGFRP00533 1210 aa25.43■■□□□ 1.66
ABCA3-206ENST00000569062 KLRK1P26718 216 aa25.43■■□□□ 1.66
ABCA3-206ENST00000569062 PODNQ7Z5L7 613 aa25.43■■□□□ 1.66
ABCA3-206ENST00000569062 HELBQ8NG08 1087 aaPredicted RBP25.43■■□□□ 1.66
ABCA3-206ENST00000569062 PGAP2Q9UHJ9 254 aa25.43■■□□□ 1.66
ABCA3-206ENST00000569062 SNAP23O00161 211 aa25.42■■□□□ 1.66
ABCA3-206ENST00000569062 TAF5LO75529 589 aa25.42■■□□□ 1.66
ABCA3-206ENST00000569062 TBC1D10BQ4KMP7 808 aaPredicted RBP25.42■■□□□ 1.66
ABCA3-206ENST00000569062 TAF7LQ5H9L4 462 aa25.41■■□□□ 1.66
ABCA3-206ENST00000569062 RSBN1LQ6PCB5 846 aaPredicted RBP25.41■■□□□ 1.66
ABCA3-206ENST00000569062 BICC1Q9H694 974 aaKnown RBP25.41■■□□□ 1.66
ABCA3-206ENST00000569062 NOB1Q9ULX3 412 aaKnown RBP25.41■■□□□ 1.66
ABCA3-206ENST00000569062 POLR2AP24928 1970 aaKnown RBP25.4■■□□□ 1.66
ABCA3-206ENST00000569062 USP17L3A6NCW0 530 aa25.4■■□□□ 1.66
ABCA3-206ENST00000569062 USP17L4A6NCW7 530 aa25.4■■□□□ 1.66
ABCA3-206ENST00000569062 RBM26Q5T8P6 1007 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms