RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CSF1RP07333 972 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 IL15P40933 162 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-214ENST00000567572 PTH1RQ03431 593 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
CMTM3-214ENST00000567572 HMG20BQ9P0W2 317 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 SYCE3A1L190 88 aa21.16■□□□□ 0.98
CMTM3-214ENST00000567572 EYA2O00167 538 aa21.16■□□□□ 0.98
CMTM3-214ENST00000567572 LETM1O95202 739 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 ANKRD1Q15327 319 aa21.16■□□□□ 0.98
CMTM3-214ENST00000567572 FOXD4L5Q5VV16 416 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 PRPF40BQ6NWY9 871 aaKnown RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 FOXD4L4Q8WXT5 416 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 GPR108Q9NPR9 543 aa21.16■□□□□ 0.98
CMTM3-214ENST00000567572 ZNF34Q8IZ26 560 aa21.16■□□□□ 0.98
CMTM3-214ENST00000567572 ANO8Q9HCE9 1232 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 RBM8AQ9Y5S9 174 aaKnown RBP21.16■□□□□ 0.98
CMTM3-214ENST00000567572 NHSQ6T4R5 1651 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 ATP5JP18859 108 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 SYT1P21579 422 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 FAM184AQ8NB25 1140 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
CMTM3-214ENST00000567572 UBN2Q6ZU65 1347 aa21.15■□□□□ 0.98
CMTM3-214ENST00000567572 F13A1P00488 732 aa21.14■□□□□ 0.98
CMTM3-214ENST00000567572 HSPA1LP34931 641 aa21.14■□□□□ 0.98
CMTM3-214ENST00000567572 NMIQ13287 307 aaPredicted RBP21.14■□□□□ 0.98
CMTM3-214ENST00000567572 ZNF594Q96JF6 807 aaPredicted RBP21.14■□□□□ 0.98
CMTM3-214ENST00000567572 TSPY26PQ9H489 355 aa21.14■□□□□ 0.98
CMTM3-214ENST00000567572 FBXO3Q9UK99 471 aa21.14■□□□□ 0.98
CMTM3-214ENST00000567572 MYH3P11055 1940 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 ZNF609O15014 1411 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 LRRC24Q50LG9 513 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 USP48Q86UV5 1035 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 FSD1Q9BTV5 496 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.97
CMTM3-214ENST00000567572 UBE2HP62256 183 aa21.13■□□□□ 0.97
CMTM3-214ENST00000567572 SYNE4Q8N205 404 aa21.13■□□□□ 0.97
CMTM3-214ENST00000567572 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
CMTM3-214ENST00000567572 MCM5P33992 734 aa21.12■□□□□ 0.97
CMTM3-214ENST00000567572 KCNJ4P48050 445 aa21.12■□□□□ 0.97
CMTM3-214ENST00000567572 BCORQ6W2J9 1755 aa21.12■□□□□ 0.97
CMTM3-214ENST00000567572 CAMTA2O94983 1202 aa21.12■□□□□ 0.97
CMTM3-214ENST00000567572 CHAMP1Q96JM3 812 aa21.12■□□□□ 0.97
CMTM3-214ENST00000567572 TRMT112Q9UI30 125 aaKnown RBP21.12■□□□□ 0.97
CMTM3-214ENST00000567572 BTAF1O14981 1849 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 SLC27A2O14975 620 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 MSNP26038 577 aaKnown RBP21.11■□□□□ 0.97
CMTM3-214ENST00000567572 CTSWP56202 376 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 KRT32Q14532 448 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 ADCK5Q3MIX3 580 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 CCDC183Q5T5S1 534 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
CMTM3-214ENST00000567572 PUS3Q9BZE2 481 aaKnown RBP21.11■□□□□ 0.97
CMTM3-214ENST00000567572 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 PDCP20941 246 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 UVSSAQ2YD98 709 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 MEX3CQ5U5Q3 659 aaKnown RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 TTLL11Q8NHH1 800 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 ATRNO75882 1429 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 GJB2P29033 226 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 IFIT5Q13325 482 aaKnown RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
CMTM3-214ENST00000567572 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 GJD4Q96KN9 370 aaPredicted RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 NOL7Q9UMY1 257 aaKnown RBP21.1■□□□□ 0.97
CMTM3-214ENST00000567572 AFF2P51816 1311 aa21.09■□□□□ 0.97
CMTM3-214ENST00000567572 A0A0D9SFI3 127 aa21.09■□□□□ 0.97
CMTM3-214ENST00000567572 LINC00116Q8NCU8 138 aa21.09■□□□□ 0.97
CMTM3-214ENST00000567572 LARGE1O95461 756 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 BLOC1S2Q6QNY1 142 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 PTF1AQ7RTS3 328 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 CCDC83Q8IWF9 413 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 HAUS7Q99871 368 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 MTMR6Q9Y217 621 aa21.08■□□□□ 0.97
CMTM3-214ENST00000567572 LRP5O75197 1615 aa21.08■□□□□ 0.96
CMTM3-214ENST00000567572 PDE8AO60658 829 aa21.08■□□□□ 0.96
CMTM3-214ENST00000567572 AK7Q96M32 723 aa21.08■□□□□ 0.96
CMTM3-214ENST00000567572 CCDC85AQ96PX6 553 aaPredicted RBP21.08■□□□□ 0.96
CMTM3-214ENST00000567572 GREM2Q9H772 168 aa21.08■□□□□ 0.96
CMTM3-214ENST00000567572 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.08■□□□□ 0.96
CMTM3-214ENST00000567572 RIC1Q4ADV7 1423 aa21.07■□□□□ 0.96
CMTM3-214ENST00000567572 CNTNAP4Q9C0A0 1308 aa21.07■□□□□ 0.96
CMTM3-214ENST00000567572 GADD45BO75293 160 aaPredicted RBP21.07■□□□□ 0.96
CMTM3-214ENST00000567572 CEP126Q9P2H0 1117 aa21.07■□□□□ 0.96
CMTM3-214ENST00000567572 CCDC39Q9UFE4 941 aa21.07■□□□□ 0.96
CMTM3-214ENST00000567572 RPS6KB1P23443 525 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 ME3Q16798 604 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 PARP10Q53GL7 1025 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 SUSD4Q5VX71 490 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 CNPY2Q9Y2B0 182 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 LAMB2P55268 1798 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 A0A1B0GUL7 405 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 ONECUT3O60422 494 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-214ENST00000567572 CPA1P15085 419 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 ITGA6P23229 1130 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 TIMM10P62072 90 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 TAF7LQ5H9L4 462 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 EDC3Q96F86 508 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms