RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ANP32CO43423 234 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 KRT24Q2M2I5 525 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
LINC00564-201ENST00000567258 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
LINC00564-201ENST00000567258 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
LINC00564-201ENST00000567258 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
LINC00564-201ENST00000567258 DDNO94850 711 aaPredicted RBP13.4□□□□□ -0.26
LINC00564-201ENST00000567258 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
LINC00564-201ENST00000567258 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
LINC00564-201ENST00000567258 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
LINC00564-201ENST00000567258 PLBD2Q8NHP8 589 aa13.4□□□□□ -0.26
LINC00564-201ENST00000567258 PSMD1Q99460 953 aa13.4□□□□□ -0.26
LINC00564-201ENST00000567258 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
LINC00564-201ENST00000567258 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
LINC00564-201ENST00000567258 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
LINC00564-201ENST00000567258 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
LINC00564-201ENST00000567258 EIF6P56537 245 aaKnown RBP13.38□□□□□ -0.27
LINC00564-201ENST00000567258 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
LINC00564-201ENST00000567258 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
LINC00564-201ENST00000567258 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
LINC00564-201ENST00000567258 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
LINC00564-201ENST00000567258 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
LINC00564-201ENST00000567258 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
LINC00564-201ENST00000567258 TAF1P21675 1872 aa13.37□□□□□ -0.27
LINC00564-201ENST00000567258 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 BBOX1O75936 387 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
LINC00564-201ENST00000567258 ZNF853P0CG23 659 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
LINC00564-201ENST00000567258 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
LINC00564-201ENST00000567258 POTECB2RU33 542 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
LINC00564-201ENST00000567258 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
LINC00564-201ENST00000567258 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
LINC00564-201ENST00000567258 TMC4Q7Z404 712 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 NIM1KQ8IY84 436 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 GPC2Q8N158 579 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 VPS33BQ9H267 617 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 DDX60Q8IY21 1712 aaKnown RBP13.35□□□□□ -0.27
LINC00564-201ENST00000567258 ABCC4O15439 1325 aa13.35□□□□□ -0.27
LINC00564-201ENST00000567258 FZD9O00144 591 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
LINC00564-201ENST00000567258 LDHDQ86WU2 507 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 MPNDQ8N594 471 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
LINC00564-201ENST00000567258 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 ZNF541Q9H0D2 1346 aa13.34□□□□□ -0.27
LINC00564-201ENST00000567258 TK2O00142 265 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 PSEN2P49810 448 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 HTRA3P83110 453 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 GRAPQ13588 217 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 DMRTA1Q5VZB9 504 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
LINC00564-201ENST00000567258 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
LINC00564-201ENST00000567258 TAF1DQ9H5J8 278 aaPredicted RBP13.33□□□□□ -0.28
LINC00564-201ENST00000567258 EPHX2P34913 555 aa13.32□□□□□ -0.28
LINC00564-201ENST00000567258 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
LINC00564-201ENST00000567258 RTL5Q5HYW3 569 aaPredicted RBP13.32□□□□□ -0.28
LINC00564-201ENST00000567258 C8orf58Q8NAV2 365 aa13.32□□□□□ -0.28
LINC00564-201ENST00000567258 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
LINC00564-201ENST00000567258 PHAXQ9H814 394 aaKnown RBP13.32□□□□□ -0.28
LINC00564-201ENST00000567258 MYH3P11055 1940 aa13.31□□□□□ -0.28
LINC00564-201ENST00000567258 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
LINC00564-201ENST00000567258 NEXNQ0ZGT2 675 aa13.31□□□□□ -0.28
LINC00564-201ENST00000567258 TRIM28Q13263 835 aaKnown RBP13.31□□□□□ -0.28
LINC00564-201ENST00000567258 AOC3Q16853 763 aa13.31□□□□□ -0.28
LINC00564-201ENST00000567258 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
LINC00564-201ENST00000567258 MYD88Q99836 296 aa13.31□□□□□ -0.28
LINC00564-201ENST00000567258 HRO43593 1189 aa13.3□□□□□ -0.28
LINC00564-201ENST00000567258 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
LINC00564-201ENST00000567258 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
LINC00564-201ENST00000567258 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
LINC00564-201ENST00000567258 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
LINC00564-201ENST00000567258 SNED1Q8TER0 1413 aa13.3□□□□□ -0.28
LINC00564-201ENST00000567258 TNIP1Q15025 636 aa13.29□□□□□ -0.28
LINC00564-201ENST00000567258 SF3B3Q15393 1217 aaKnown RBP13.29□□□□□ -0.28
LINC00564-201ENST00000567258 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
LINC00564-201ENST00000567258 PLPP6Q8IY26 295 aa13.29□□□□□ -0.28
LINC00564-201ENST00000567258 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
LINC00564-201ENST00000567258 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
LINC00564-201ENST00000567258 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
LINC00564-201ENST00000567258 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
LINC00564-201ENST00000567258 IL16Q14005 1332 aa13.29□□□□□ -0.28
LINC00564-201ENST00000567258 FOXK1P85037 733 aa13.28□□□□□ -0.28
LINC00564-201ENST00000567258 METTL22Q9BUU2 404 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms