RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 MAP3K19Q56UN5 1328 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 SBNO2Q9Y2G9 1366 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 CD163L1Q9NR16 1453 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 DXOO77932 396 aaKnown RBP8.42□□□□□ -1.06
UBFD1-204ENST00000565634 SOX10P56693 466 aa8.42□□□□□ -1.06
UBFD1-204ENST00000565634 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
UBFD1-204ENST00000565634 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
UBFD1-204ENST00000565634 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
UBFD1-204ENST00000565634 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
UBFD1-204ENST00000565634 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
UBFD1-204ENST00000565634 WNT7AO00755 349 aa8.41□□□□□ -1.06
UBFD1-204ENST00000565634 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
UBFD1-204ENST00000565634 TRIM32Q13049 653 aa8.41□□□□□ -1.06
UBFD1-204ENST00000565634 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
UBFD1-204ENST00000565634 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
UBFD1-204ENST00000565634 ATG3Q9NT62 314 aa8.41□□□□□ -1.06
UBFD1-204ENST00000565634 NSD3Q9BZ95 1437 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 PASKQ96RG2 1323 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 TTC24A2A3L6 582 aaPredicted RBP8.4□□□□□ -1.06
UBFD1-204ENST00000565634 NFKBIEO00221 500 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 AXIN1O15169 862 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 SMPD1P17405 629 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 ERFEQ4G0M1 354 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
UBFD1-204ENST00000565634 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
UBFD1-204ENST00000565634 GMPR2Q9P2T1 348 aaKnown RBP8.4□□□□□ -1.06
UBFD1-204ENST00000565634 HOXA2O43364 376 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 AOC2O75106 756 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
UBFD1-204ENST00000565634 USP46P62068 366 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 DGKZQ13574 1117 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 HSP90AB2PQ58FF8 381 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 MAP1SQ66K74 1059 aaPredicted RBP8.39□□□□□ -1.07
UBFD1-204ENST00000565634 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 TMOD3Q9NYL9 352 aa8.39□□□□□ -1.07
UBFD1-204ENST00000565634 ABT1Q9ULW3 272 aaKnown RBP8.39□□□□□ -1.07
UBFD1-204ENST00000565634 C21orf2O43822 256 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 CTC1Q2NKJ3 1217 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
UBFD1-204ENST00000565634 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
UBFD1-204ENST00000565634 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 KDM4CQ9H3R0 1056 aa8.38□□□□□ -1.07
UBFD1-204ENST00000565634 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
UBFD1-204ENST00000565634 A0A1W2PP64 1363 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 PCDH11XQ9BZA7 1347 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 PCDH11YQ9BZA8 1340 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 FER1L6Q2WGJ9 1857 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 J3QL48 77 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
UBFD1-204ENST00000565634 FYB1O15117 783 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 SKOR1P84550 965 aa8.37□□□□□ -1.07
UBFD1-204ENST00000565634 MAP2K1Q02750 393 aaPredicted RBP8.37□□□□□ -1.07
UBFD1-204ENST00000565634 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
UBFD1-204ENST00000565634 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 TM4SF1P30408 202 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 HDGFL2Q7Z4V5 671 aaPredicted RBP8.36□□□□□ -1.07
UBFD1-204ENST00000565634 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 ZNF622Q969S3 477 aaKnown RBP eCLIP8.36□□□□□ -1.077e-8■■□□□ 12.6
UBFD1-204ENST00000565634 GPR101Q96P66 508 aaPredicted RBP8.36□□□□□ -1.07
UBFD1-204ENST00000565634 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
UBFD1-204ENST00000565634 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
UBFD1-204ENST00000565634 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 PODXL2Q9NZ53 605 aa8.36□□□□□ -1.07
UBFD1-204ENST00000565634 RASSF10A6NK89 507 aa8.35□□□□□ -1.07
UBFD1-204ENST00000565634 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
UBFD1-204ENST00000565634 USPL1Q5W0Q7 1092 aa8.35□□□□□ -1.07
UBFD1-204ENST00000565634 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
UBFD1-204ENST00000565634 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
UBFD1-204ENST00000565634 COG3Q96JB2 828 aa8.35□□□□□ -1.07
UBFD1-204ENST00000565634 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
UBFD1-204ENST00000565634 COL5A3P25940 1745 aaPredicted RBP8.34□□□□□ -1.07
UBFD1-204ENST00000565634 TRPM7Q96QT4 1865 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 SCN4AP35499 1836 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 TRIM66O15016 1216 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 HMGB2P26583 209 aaKnown RBP8.34□□□□□ -1.07
UBFD1-204ENST00000565634 CLCN1P35523 988 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 CC2D1BQ5T0F9 858 aaKnown RBP8.34□□□□□ -1.07
UBFD1-204ENST00000565634 LDHDQ86WU2 507 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 TERF2IPQ9NYB0 399 aa8.34□□□□□ -1.07
UBFD1-204ENST00000565634 POLR2AP24928 1970 aaKnown RBP8.33□□□□□ -1.08
UBFD1-204ENST00000565634 ZC3H4Q9UPT8 1303 aaKnown RBP8.33□□□□□ -1.08
UBFD1-204ENST00000565634 JUNDP17535 347 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-204ENST00000565634 CRKLP46109 303 aaKnown RBP8.33□□□□□ -1.08
UBFD1-204ENST00000565634 PDE4DQ08499 809 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 NFIXQ14938 502 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
UBFD1-204ENST00000565634 HPS1Q92902 700 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 PCDHGC3Q9UN70 934 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms