RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 FBXO46Q6PJ61 603 aaPredicted RBP23.25■■□□□ 1.31
TRAF7-202ENST00000564067 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
TRAF7-202ENST00000564067 DLG5Q8TDM6 1919 aa23.24■■□□□ 1.31
TRAF7-202ENST00000564067 AIMP1Q12904 312 aaKnown RBP23.24■■□□□ 1.31
TRAF7-202ENST00000564067 PROSER3Q2NL68 480 aa23.24■■□□□ 1.31
TRAF7-202ENST00000564067 ANGEL2Q5VTE6 544 aaKnown RBP23.24■■□□□ 1.31
TRAF7-202ENST00000564067 AGBL3Q8NEM8 1001 aa23.24■■□□□ 1.31
TRAF7-202ENST00000564067 XAGE3Q8WTP9 111 aa23.24■■□□□ 1.31
TRAF7-202ENST00000564067 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
TRAF7-202ENST00000564067 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
TRAF7-202ENST00000564067 GPSM2P81274 684 aa23.23■■□□□ 1.31
TRAF7-202ENST00000564067 TBC1D16Q8TBP0 767 aa23.23■■□□□ 1.31
TRAF7-202ENST00000564067 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
TRAF7-202ENST00000564067 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
TRAF7-202ENST00000564067 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
TRAF7-202ENST00000564067 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
TRAF7-202ENST00000564067 TBC1D8O95759 1140 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 ANXA1P04083 346 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 SCARF1Q14162 830 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 ZNF609O15014 1411 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 PAPPA2Q9BXP8 1791 aa23.22■■□□□ 1.31
TRAF7-202ENST00000564067 GPR25O00155 361 aa23.21■■□□□ 1.31
TRAF7-202ENST00000564067 TM4SF4P48230 202 aa23.21■■□□□ 1.31
TRAF7-202ENST00000564067 ASTN2O75129 1339 aaPredicted RBP23.2■■□□□ 1.3
TRAF7-202ENST00000564067 PODXL2Q9NZ53 605 aa23.2■■□□□ 1.3
TRAF7-202ENST00000564067 TAF1P21675 1872 aa23.19■■□□□ 1.3
TRAF7-202ENST00000564067 RPS8P62241 208 aaKnown RBP23.19■■□□□ 1.3
TRAF7-202ENST00000564067 SREBF2Q12772 1141 aa23.19■■□□□ 1.3
TRAF7-202ENST00000564067 RSBN1LQ6PCB5 846 aaPredicted RBP23.19■■□□□ 1.3
TRAF7-202ENST00000564067 HABP4Q5JVS0 413 aaKnown RBP23.18■■□□□ 1.3
TRAF7-202ENST00000564067 FAM89AQ96GI7 184 aa23.18■■□□□ 1.3
TRAF7-202ENST00000564067 CFHR5Q9BXR6 569 aa23.18■■□□□ 1.3
TRAF7-202ENST00000564067 FKTNO75072 461 aa23.17■■□□□ 1.3
TRAF7-202ENST00000564067 USP17L8P0C7I0 530 aa23.17■■□□□ 1.3
TRAF7-202ENST00000564067 MYOZ2Q9NPC6 264 aa23.17■■□□□ 1.3
TRAF7-202ENST00000564067 HSP90B1P14625 803 aaKnown RBP23.16■■□□□ 1.3
TRAF7-202ENST00000564067 NF2P35240 595 aa23.16■■□□□ 1.3
TRAF7-202ENST00000564067 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
TRAF7-202ENST00000564067 ANKIB1Q9P2G1 1089 aa23.16■■□□□ 1.3
TRAF7-202ENST00000564067 UBE2Q2LH0YL09 131 aa23.15■■□□□ 1.3
TRAF7-202ENST00000564067 UFL1O94874 794 aa23.15■■□□□ 1.3
TRAF7-202ENST00000564067 INTS3Q68E01 1043 aaKnown RBP23.15■■□□□ 1.3
TRAF7-202ENST00000564067 GGA1Q9UJY5 639 aa23.15■■□□□ 1.3
TRAF7-202ENST00000564067 TTLL12Q14166 644 aaPredicted RBP23.14■■□□□ 1.29
TRAF7-202ENST00000564067 ANKRD13DQ6ZTN6 518 aa23.14■■□□□ 1.29
TRAF7-202ENST00000564067 ISCA1Q9BUE6 129 aa23.14■■□□□ 1.29
TRAF7-202ENST00000564067 ALDH1A1P00352 501 aa23.13■■□□□ 1.29
TRAF7-202ENST00000564067 LMOD3Q0VAK6 560 aa23.13■■□□□ 1.29
TRAF7-202ENST00000564067 GMLQ99445 158 aa23.13■■□□□ 1.29
TRAF7-202ENST00000564067 SCN9AQ15858 1988 aa23.12■■□□□ 1.29
TRAF7-202ENST00000564067 IRS4O14654 1257 aaPredicted RBP23.12■■□□□ 1.29
TRAF7-202ENST00000564067 MOB2Q70IA6 237 aa23.12■■□□□ 1.29
TRAF7-202ENST00000564067 PODNQ7Z5L7 613 aa23.12■■□□□ 1.29
TRAF7-202ENST00000564067 USP17L3A6NCW0 530 aa23.11■■□□□ 1.29
TRAF7-202ENST00000564067 USP17L4A6NCW7 530 aa23.11■■□□□ 1.29
TRAF7-202ENST00000564067 RIPK4P57078 832 aa23.11■■□□□ 1.29
TRAF7-202ENST00000564067 TRIM28Q13263 835 aaKnown RBP23.11■■□□□ 1.29
TRAF7-202ENST00000564067 USP17L1Q7RTZ2 530 aa23.11■■□□□ 1.29
TRAF7-202ENST00000564067 MMP14P50281 582 aa23.09■■□□□ 1.29
TRAF7-202ENST00000564067 ARMC9Q7Z3E5 817 aa23.09■■□□□ 1.29
TRAF7-202ENST00000564067 OGFOD1Q8N543 542 aa23.09■■□□□ 1.29
TRAF7-202ENST00000564067 ZNF428Q96B54 188 aa23.09■■□□□ 1.29
TRAF7-202ENST00000564067 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.29
TRAF7-202ENST00000564067 INHBEP58166 350 aa23.08■■□□□ 1.29
TRAF7-202ENST00000564067 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.29
TRAF7-202ENST00000564067 CHPF2Q9P2E5 772 aa23.08■■□□□ 1.29
TRAF7-202ENST00000564067 DBF4Q9UBU7 674 aaPredicted RBP23.08■■□□□ 1.29
TRAF7-202ENST00000564067 XDHP47989 1333 aa23.07■■□□□ 1.28
TRAF7-202ENST00000564067 MKI67P46013 3256 aaKnown RBP23.06■■□□□ 1.28
TRAF7-202ENST00000564067 HOXB7P09629 217 aa23.06■■□□□ 1.28
TRAF7-202ENST00000564067 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
TRAF7-202ENST00000564067 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
TRAF7-202ENST00000564067 PRAMEF18Q5VWM3 479 aa23.06■■□□□ 1.28
TRAF7-202ENST00000564067 ZBTB38Q8NAP3 1195 aaPredicted RBP23.06■■□□□ 1.28
TRAF7-202ENST00000564067 ATP2B4P23634 1241 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 MKRN3Q13064 507 aaKnown RBP23.05■■□□□ 1.28
TRAF7-202ENST00000564067 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 SEC31BQ9NQW1 1179 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 TRIM17Q9Y577 477 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 PSME4Q14997 1843 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 MYO3BQ8WXR4 1341 aa23.05■■□□□ 1.28
TRAF7-202ENST00000564067 SPRYD7Q5W111 196 aa23.04■■□□□ 1.28
TRAF7-202ENST00000564067 MANSC4A6NHS7 340 aaPredicted RBP23.03■■□□□ 1.28
TRAF7-202ENST00000564067 WNT10BO00744 389 aa23.03■■□□□ 1.28
TRAF7-202ENST00000564067 PTPN12Q05209 780 aaKnown RBP23.03■■□□□ 1.28
TRAF7-202ENST00000564067 SCAF8Q9UPN6 1271 aaKnown RBP23.03■■□□□ 1.28
TRAF7-202ENST00000564067 COL4A1P02462 1669 aa23.03■■□□□ 1.28
TRAF7-202ENST00000564067 CHL1O00533 1208 aa23.02■■□□□ 1.28
TRAF7-202ENST00000564067 LDLRAD1Q5T700 205 aa23.02■■□□□ 1.28
TRAF7-202ENST00000564067 OTOP1Q7RTM1 612 aa23.02■■□□□ 1.28
TRAF7-202ENST00000564067 APOBEC3FQ8IUX4 373 aaKnown RBP23.02■■□□□ 1.28
TRAF7-202ENST00000564067 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
TRAF7-202ENST00000564067 R3HDMLQ9H3Y0 253 aa23.02■■□□□ 1.28
TRAF7-202ENST00000564067 POTEFA5A3E0 1075 aa23.01■■□□□ 1.27
TRAF7-202ENST00000564067 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
TRAF7-202ENST00000564067 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRAF7-202ENST00000564067 ERO1AQ96HE7 468 aa23.01■■□□□ 1.27
TRAF7-202ENST00000564067 PDE8AO60658 829 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms