RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 GGA1Q9UJY5 639 aa24.11■■□□□ 1.45
TRADD-203ENST00000563348 MINPP1Q9UNW1 487 aa24.11■■□□□ 1.45
TRADD-203ENST00000563348 YDJCA8MPS7 323 aa24.1■■□□□ 1.45
TRADD-203ENST00000563348 ITGA6P23229 1130 aa24.1■■□□□ 1.45
TRADD-203ENST00000563348 FOXO4P98177 505 aa24.1■■□□□ 1.45
TRADD-203ENST00000563348 TNIP1Q15025 636 aa24.1■■□□□ 1.45
TRADD-203ENST00000563348 EAPPQ56P03 285 aaPredicted RBP24.1■■□□□ 1.45
TRADD-203ENST00000563348 C9orf78Q9NZ63 289 aaPredicted RBP24.1■■□□□ 1.45
TRADD-203ENST00000563348 XDHP47989 1333 aa24.1■■□□□ 1.45
TRADD-203ENST00000563348 RAD17O75943 681 aa24.09■■□□□ 1.45
TRADD-203ENST00000563348 UFL1O94874 794 aa24.09■■□□□ 1.45
TRADD-203ENST00000563348 IGHMBP2P38935 993 aaKnown RBP24.09■■□□□ 1.45
TRADD-203ENST00000563348 EPS15P42566 896 aa24.09■■□□□ 1.45
TRADD-203ENST00000563348 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
TRADD-203ENST00000563348 GPR101Q96P66 508 aaPredicted RBP24.09■■□□□ 1.45
TRADD-203ENST00000563348 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
TRADD-203ENST00000563348 ATP2B4P23634 1241 aa24.08■■□□□ 1.45
TRADD-203ENST00000563348 DBNDD1Q9H9R9 158 aa24.08■■□□□ 1.45
TRADD-203ENST00000563348 DOK7Q18PE1 504 aa24.07■■□□□ 1.44
TRADD-203ENST00000563348 SMC4Q9NTJ3 1288 aa24.07■■□□□ 1.44
TRADD-203ENST00000563348 GPRC5DQ9NZD1 345 aa24.07■■□□□ 1.44
TRADD-203ENST00000563348 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
TRADD-203ENST00000563348 MYH3P11055 1940 aa24.06■■□□□ 1.44
TRADD-203ENST00000563348 ANKRD18BA2A2Z9 1011 aa24.06■■□□□ 1.44
TRADD-203ENST00000563348 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
TRADD-203ENST00000563348 EPHA10Q5JZY3 1008 aa24.06■■□□□ 1.44
TRADD-203ENST00000563348 DNAJC5GQ8N7S2 189 aa24.06■■□□□ 1.44
TRADD-203ENST00000563348 MPHOSPH8Q99549 860 aa24.06■■□□□ 1.44
TRADD-203ENST00000563348 LTBP1Q14766 1721 aa24.05■■□□□ 1.44
TRADD-203ENST00000563348 ECE2O60344 883 aa24.05■■□□□ 1.44
TRADD-203ENST00000563348 LMBR1LQ6UX01 489 aa24.05■■□□□ 1.44
TRADD-203ENST00000563348 BRPF1P55201 1214 aaPredicted RBP24.04■■□□□ 1.44
TRADD-203ENST00000563348 HTRA3P83110 453 aa24.04■■□□□ 1.44
TRADD-203ENST00000563348 IFIT5Q13325 482 aaKnown RBP24.04■■□□□ 1.44
TRADD-203ENST00000563348 USP50Q70EL3 339 aaPredicted RBP24.04■■□□□ 1.44
TRADD-203ENST00000563348 KCNQ5Q9NR82 932 aa24.04■■□□□ 1.44
TRADD-203ENST00000563348 UTYO14607 1347 aa24.04■■□□□ 1.44
TRADD-203ENST00000563348 WTIPA6NIX2 430 aaPredicted RBP24.03■■□□□ 1.44
TRADD-203ENST00000563348 G3V3G9 751 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 PSMD14O00487 310 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 NBPF7P0C2Y1 421 aaPredicted RBP24.03■■□□□ 1.44
TRADD-203ENST00000563348 CCT4P50991 539 aaKnown RBP24.03■■□□□ 1.44
TRADD-203ENST00000563348 DCAF8Q5TAQ9 597 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 ANKRD2Q9GZV1 360 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 ADARB2Q9NS39 739 aaKnown RBP24.03■■□□□ 1.44
TRADD-203ENST00000563348 LEMD3Q9Y2U8 911 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 CHMP3Q9Y3E7 222 aa24.03■■□□□ 1.44
TRADD-203ENST00000563348 ITGBL1O95965 494 aaPredicted RBP24.02■■□□□ 1.44
TRADD-203ENST00000563348 KAZALD1Q96I82 304 aa24.02■■□□□ 1.44
TRADD-203ENST00000563348 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
TRADD-203ENST00000563348 RARSP54136 660 aaKnown RBP24.01■■□□□ 1.43
TRADD-203ENST00000563348 HNRNPUQ00839 825 aaKnown RBP eCLIP24.01■■□□□ 1.43
TRADD-203ENST00000563348 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
TRADD-203ENST00000563348 DPF2Q92785 391 aa24.01■■□□□ 1.43
TRADD-203ENST00000563348 CNOT7Q9UIV1 285 aaKnown RBP24.01■■□□□ 1.43
TRADD-203ENST00000563348 NOB1Q9ULX3 412 aaKnown RBP24.01■■□□□ 1.43
TRADD-203ENST00000563348 CCDC57Q2TAC2 916 aa24■■□□□ 1.43
TRADD-203ENST00000563348 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
TRADD-203ENST00000563348 ZBTB12Q9Y330 459 aaPredicted RBP24■■□□□ 1.43
TRADD-203ENST00000563348 PASKQ96RG2 1323 aa24■■□□□ 1.43
TRADD-203ENST00000563348 VIL1P09327 827 aaKnown RBP23.99■■□□□ 1.43
TRADD-203ENST00000563348 PODNQ7Z5L7 613 aa23.99■■□□□ 1.43
TRADD-203ENST00000563348 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
TRADD-203ENST00000563348 H7C1D1 291 aa23.98■■□□□ 1.43
TRADD-203ENST00000563348 RPS12P25398 132 aaKnown RBP23.98■■□□□ 1.43
TRADD-203ENST00000563348 CHRNDQ07001 517 aa23.98■■□□□ 1.43
TRADD-203ENST00000563348 ZNF804BA4D1E1 1349 aa23.98■■□□□ 1.43
TRADD-203ENST00000563348 MED23Q9ULK4 1368 aa23.98■■□□□ 1.43
TRADD-203ENST00000563348 ADAMTSL1Q8N6G6 1762 aa23.97■■□□□ 1.43
TRADD-203ENST00000563348 ZNF594Q96JF6 807 aaPredicted RBP23.97■■□□□ 1.43
TRADD-203ENST00000563348 API5Q9BZZ5 524 aaKnown RBP23.97■■□□□ 1.43
TRADD-203ENST00000563348 RABL6Q3YEC7 729 aaPredicted RBP23.96■■□□□ 1.43
TRADD-203ENST00000563348 TAF7LQ5H9L4 462 aa23.96■■□□□ 1.43
TRADD-203ENST00000563348 LDHAL6AQ6ZMR3 332 aa23.96■■□□□ 1.43
TRADD-203ENST00000563348 MICALL2Q8IY33 904 aa23.96■■□□□ 1.43
TRADD-203ENST00000563348 KLRG1Q96E93 195 aa23.96■■□□□ 1.43
TRADD-203ENST00000563348 BICC1Q9H694 974 aaKnown RBP23.96■■□□□ 1.43
TRADD-203ENST00000563348 SHTN1A0MZ66 631 aa23.95■■□□□ 1.42
TRADD-203ENST00000563348 HIRAP54198 1017 aaPredicted RBP23.95■■□□□ 1.42
TRADD-203ENST00000563348 TXNRD3Q86VQ6 643 aa23.95■■□□□ 1.42
TRADD-203ENST00000563348 CREBZFQ9NS37 354 aa23.95■■□□□ 1.42
TRADD-203ENST00000563348 PGAP2Q9UHJ9 254 aa23.95■■□□□ 1.42
TRADD-203ENST00000563348 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
TRADD-203ENST00000563348 HELBQ8NG08 1087 aaPredicted RBP23.94■■□□□ 1.42
TRADD-203ENST00000563348 ZC3H15Q8WU90 426 aaKnown RBP23.94■■□□□ 1.42
TRADD-203ENST00000563348 ARHGAP45Q92619 1136 aa23.94■■□□□ 1.42
TRADD-203ENST00000563348 COA1Q9GZY4 146 aa23.94■■□□□ 1.42
TRADD-203ENST00000563348 USP17L3A6NCW0 530 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 USP17L4A6NCW7 530 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 TAF5LO75529 589 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 KCNJ4P48050 445 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 RSBN1LQ6PCB5 846 aaPredicted RBP23.93■■□□□ 1.42
TRADD-203ENST00000563348 USP17L1Q7RTZ2 530 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 TRPM4Q8TD43 1214 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 CNNM1Q9NRU3 951 aa23.93■■□□□ 1.42
TRADD-203ENST00000563348 AGBL3Q8NEM8 1001 aa23.92■■□□□ 1.42
TRADD-203ENST00000563348 SCN9AQ15858 1988 aa23.92■■□□□ 1.42
TRADD-203ENST00000563348 SPEF2Q9C093 1822 aa23.91■■□□□ 1.42
TRADD-203ENST00000563348 KIF16BQ96L93 1317 aa23.91■■□□□ 1.42
TRADD-203ENST00000563348 TMEM88BA6NKF7 163 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms