RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TBC1D16Q8TBP0 767 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
UBR1-204ENST00000563239 GPR101Q96P66 508 aaPredicted RBP10.77□□□□□ -0.69
UBR1-204ENST00000563239 MEIS3Q99687 375 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 TMX4Q9H1E5 349 aaPredicted RBP10.77□□□□□ -0.69
UBR1-204ENST00000563239 VPS33BQ9H267 617 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 ZNF541Q9H0D2 1346 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 ANKRD18BA2A2Z9 1011 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 POTECB2RU33 542 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 KIF3CO14782 793 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 KIAA2012Q0VF49 1180 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 IFIT5Q13325 482 aaKnown RBP10.76□□□□□ -0.69
UBR1-204ENST00000563239 TMEM57Q8N5G2 664 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
UBR1-204ENST00000563239 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
UBR1-204ENST00000563239 SPEF2Q9C093 1822 aa10.76□□□□□ -0.69
UBR1-204ENST00000563239 DDNO94850 711 aaPredicted RBP10.75□□□□□ -0.69
UBR1-204ENST00000563239 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
UBR1-204ENST00000563239 RFX5P48382 616 aaPredicted RBP10.75□□□□□ -0.69
UBR1-204ENST00000563239 LARGE2Q8N3Y3 721 aa10.75□□□□□ -0.69
UBR1-204ENST00000563239 RCAN3Q9UKA8 241 aa10.75□□□□□ -0.69
UBR1-204ENST00000563239 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
UBR1-204ENST00000563239 XDHP47989 1333 aa10.75□□□□□ -0.69
UBR1-204ENST00000563239 YDJCA8MPS7 323 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 RIMBP2O15034 1052 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 UBTFL1P0CB47 393 aaPredicted RBP10.74□□□□□ -0.69
UBR1-204ENST00000563239 WASHC4Q2M389 1173 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 CCDC57Q2TAC2 916 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
UBR1-204ENST00000563239 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
UBR1-204ENST00000563239 RRAGCQ9HB90 399 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 GGA1Q9UJY5 639 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
UBR1-204ENST00000563239 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 IRS2Q9Y4H2 1338 aa10.74□□□□□ -0.69
UBR1-204ENST00000563239 WDR90Q96KV7 1748 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 SNAP23O00161 211 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 PLIN1O60240 522 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 UFL1O94874 794 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 ATP2B4P23634 1241 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 CHRNDQ07001 517 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 CXCL9Q07325 125 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 PANK1Q8TE04 598 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 MPHOSPH8Q99549 860 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 KCNQ5Q9NR82 932 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 ZNRF3Q9ULT6 936 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 RIPOR2Q9Y4F9 1068 aa10.73□□□□□ -0.69
UBR1-204ENST00000563239 A0A1B0GUL6 1792 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
UBR1-204ENST00000563239 TAF5LO75529 589 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 GNAI3P08754 354 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 KLRK1P26718 216 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
UBR1-204ENST00000563239 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 LRRC24Q50LG9 513 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 DPY19L2Q6NUT2 758 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 TXNRD3Q86VQ6 643 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 HELBQ8NG08 1087 aaPredicted RBP10.72□□□□□ -0.69
UBR1-204ENST00000563239 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
UBR1-204ENST00000563239 EYA3Q99504 573 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
UBR1-204ENST00000563239 ZNF804BA4D1E1 1349 aa10.71□□□□□ -0.69
UBR1-204ENST00000563239 GPC2Q8N158 579 aa10.71□□□□□ -0.69
UBR1-204ENST00000563239 ZC3H12CQ9C0D7 883 aaKnown RBP10.71□□□□□ -0.69
UBR1-204ENST00000563239 DBNDD1Q9H9R9 158 aa10.71□□□□□ -0.69
UBR1-204ENST00000563239 LEMD3Q9Y2U8 911 aa10.71□□□□□ -0.69
UBR1-204ENST00000563239 MED23Q9ULK4 1368 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 ECE2O60344 883 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 RAD17O75943 681 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 VEGFAP15692 232 aaPredicted RBP10.7□□□□□ -0.7
UBR1-204ENST00000563239 EIF6P56537 245 aaKnown RBP10.7□□□□□ -0.7
UBR1-204ENST00000563239 MTX1Q13505 466 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 TAF7LQ5H9L4 462 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 C20orf194Q5TEA3 1177 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 FTSJ3Q8IY81 847 aaKnown RBP10.7□□□□□ -0.7
UBR1-204ENST00000563239 VGLL2Q8N8G2 317 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 CNNM1Q9NRU3 951 aa10.7□□□□□ -0.7
UBR1-204ENST00000563239 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 GNAI2P04899 355 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 SCNN1DP51172 638 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 CIAPIN1Q6FI81 312 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 C15orf52Q6ZUT6 534 aaKnown RBP10.69□□□□□ -0.7
UBR1-204ENST00000563239 ITPRIPQ8IWB1 547 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 PA2G4Q9UQ80 394 aaKnown RBP10.69□□□□□ -0.7
UBR1-204ENST00000563239 HDAC5Q9UQL6 1122 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 GJA3Q9Y6H8 435 aa10.69□□□□□ -0.7
UBR1-204ENST00000563239 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
UBR1-204ENST00000563239 PNMA6EA0A0J9YXQ4 647 aa10.68□□□□□ -0.7
UBR1-204ENST00000563239 EYA2O00167 538 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms