RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZBTB12Q9Y330 459 aaPredicted RBP20.82■□□□□ 0.92
SNX1-213ENST00000561026 SHTN1A0MZ66 631 aa20.81■□□□□ 0.92
SNX1-213ENST00000561026 ECE2O60344 883 aa20.81■□□□□ 0.92
SNX1-213ENST00000561026 MICALL2Q8IY33 904 aa20.81■□□□□ 0.92
SNX1-213ENST00000561026 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
SNX1-213ENST00000561026 GPR101Q96P66 508 aaPredicted RBP20.81■□□□□ 0.92
SNX1-213ENST00000561026 KCNQ5Q9NR82 932 aa20.81■□□□□ 0.92
SNX1-213ENST00000561026 WDR33Q9C0J8 1336 aaKnown RBP20.8■□□□□ 0.92
SNX1-213ENST00000561026 FOXN1O15353 648 aa20.8■□□□□ 0.92
SNX1-213ENST00000561026 CWF19L2Q2TBE0 894 aaKnown RBP20.8■□□□□ 0.92
SNX1-213ENST00000561026 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
SNX1-213ENST00000561026 WDR63Q8IWG1 891 aa20.8■□□□□ 0.92
SNX1-213ENST00000561026 GGA1Q9UJY5 639 aa20.8■□□□□ 0.92
SNX1-213ENST00000561026 FANCIQ9NVI1 1328 aa20.79■□□□□ 0.92
SNX1-213ENST00000561026 NEURL1BA8MQ27 555 aa20.79■□□□□ 0.92
SNX1-213ENST00000561026 UFL1O94874 794 aa20.79■□□□□ 0.92
SNX1-213ENST00000561026 CTSWP56202 376 aa20.79■□□□□ 0.92
SNX1-213ENST00000561026 GLIS2Q9BZE0 524 aaPredicted RBP20.79■□□□□ 0.92
SNX1-213ENST00000561026 WBP1LQ9NX94 342 aa20.79■□□□□ 0.92
SNX1-213ENST00000561026 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
SNX1-213ENST00000561026 RTL9Q8NET4 1388 aa20.78■□□□□ 0.92
SNX1-213ENST00000561026 RPS12P25398 132 aaKnown RBP20.78■□□□□ 0.92
SNX1-213ENST00000561026 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
SNX1-213ENST00000561026 AIDAQ96BJ3 306 aa20.78■□□□□ 0.92
SNX1-213ENST00000561026 H7C1W4 665 aa20.77■□□□□ 0.92
SNX1-213ENST00000561026 FLIIQ13045 1269 aa20.77■□□□□ 0.92
SNX1-213ENST00000561026 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
SNX1-213ENST00000561026 SAMD7Q7Z3H4 446 aa20.77■□□□□ 0.92
SNX1-213ENST00000561026 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.92
SNX1-213ENST00000561026 TLL2Q9Y6L7 1015 aa20.77■□□□□ 0.92
SNX1-213ENST00000561026 XDHP47989 1333 aa20.76■□□□□ 0.91
SNX1-213ENST00000561026 G3V3G9 751 aa20.76■□□□□ 0.91
SNX1-213ENST00000561026 VAMP4O75379 141 aa20.76■□□□□ 0.91
SNX1-213ENST00000561026 CELF2O95319 508 aaKnown RBP20.76■□□□□ 0.91
SNX1-213ENST00000561026 VIL1P09327 827 aaKnown RBP20.76■□□□□ 0.91
SNX1-213ENST00000561026 DCAF8Q5TAQ9 597 aa20.76■□□□□ 0.91
SNX1-213ENST00000561026 ECE1P42892 770 aa20.75■□□□□ 0.91
SNX1-213ENST00000561026 CTCFP49711 727 aaPredicted RBP20.75■□□□□ 0.91
SNX1-213ENST00000561026 MAP2K1Q02750 393 aaPredicted RBP20.75■□□□□ 0.91
SNX1-213ENST00000561026 UBE3BQ7Z3V4 1068 aa20.75■□□□□ 0.91
SNX1-213ENST00000561026 CAPNS2Q96L46 248 aa20.75■□□□□ 0.91
SNX1-213ENST00000561026 GREM2Q9H772 168 aa20.75■□□□□ 0.91
SNX1-213ENST00000561026 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
SNX1-213ENST00000561026 EGFRP00533 1210 aa20.74■□□□□ 0.91
SNX1-213ENST00000561026 ATP2B4P23634 1241 aa20.74■□□□□ 0.91
SNX1-213ENST00000561026 FKBP5Q13451 457 aaPredicted RBP20.74■□□□□ 0.91
SNX1-213ENST00000561026 GCKRQ14397 625 aa20.74■□□□□ 0.91
SNX1-213ENST00000561026 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
SNX1-213ENST00000561026 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
SNX1-213ENST00000561026 SAPCD2Q86UD0 394 aa20.74■□□□□ 0.91
SNX1-213ENST00000561026 PRDM10Q9NQV6 1147 aa20.74■□□□□ 0.91
SNX1-213ENST00000561026 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
SNX1-213ENST00000561026 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
SNX1-213ENST00000561026 CYP4F22Q6NT55 531 aa20.73■□□□□ 0.91
SNX1-213ENST00000561026 DNAAF4Q8WXU2 420 aa20.73■□□□□ 0.91
SNX1-213ENST00000561026 MINPP1Q9UNW1 487 aa20.73■□□□□ 0.91
SNX1-213ENST00000561026 USP48Q86UV5 1035 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 LINS1Q8NG48 757 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 GRM1Q13255 1194 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 RBM26Q5T8P6 1007 aaKnown RBP20.72■□□□□ 0.91
SNX1-213ENST00000561026 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 ZNF408Q9H9D4 720 aa20.72■□□□□ 0.91
SNX1-213ENST00000561026 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
SNX1-213ENST00000561026 SCN9AQ15858 1988 aa20.71■□□□□ 0.91
SNX1-213ENST00000561026 WTIPA6NIX2 430 aaPredicted RBP20.71■□□□□ 0.91
SNX1-213ENST00000561026 CASP7P55210 303 aa20.71■□□□□ 0.91
SNX1-213ENST00000561026 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
SNX1-213ENST00000561026 HHIPL1Q96JK4 782 aa20.71■□□□□ 0.91
SNX1-213ENST00000561026 CAPN15O75808 1086 aa20.7■□□□□ 0.9
SNX1-213ENST00000561026 LBX1P52954 281 aa20.7■□□□□ 0.9
SNX1-213ENST00000561026 RSBN1LQ6PCB5 846 aaPredicted RBP20.7■□□□□ 0.9
SNX1-213ENST00000561026 KRT26Q7Z3Y9 468 aa20.7■□□□□ 0.9
SNX1-213ENST00000561026 PODNQ7Z5L7 613 aa20.7■□□□□ 0.9
SNX1-213ENST00000561026 AGBL3Q8NEM8 1001 aa20.7■□□□□ 0.9
SNX1-213ENST00000561026 CSF1RP07333 972 aa20.69■□□□□ 0.9
SNX1-213ENST00000561026 MAP2K2P36507 400 aa20.69■□□□□ 0.9
SNX1-213ENST00000561026 IGHMBP2P38935 993 aaKnown RBP20.69■□□□□ 0.9
SNX1-213ENST00000561026 KIF4BQ2VIQ3 1234 aa20.69■□□□□ 0.9
SNX1-213ENST00000561026 DLK2Q6UY11 383 aa20.69■□□□□ 0.9
SNX1-213ENST00000561026 DCPSQ96C86 337 aaKnown RBP20.69■□□□□ 0.9
SNX1-213ENST00000561026 ZNF609O15014 1411 aa20.68■□□□□ 0.9
SNX1-213ENST00000561026 ITGA6P23229 1130 aa20.68■□□□□ 0.9
SNX1-213ENST00000561026 CCT4P50991 539 aaKnown RBP20.68■□□□□ 0.9
SNX1-213ENST00000561026 ZNF280AP59817 542 aaPredicted RBP20.68■□□□□ 0.9
SNX1-213ENST00000561026 MYH3P11055 1940 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 MED23Q9ULK4 1368 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 CACNA1FO60840 1977 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 USP17L3A6NCW0 530 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 USP17L4A6NCW7 530 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 AOC2O75106 756 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 HSPA8P11142 646 aaKnown RBP20.67■□□□□ 0.9
SNX1-213ENST00000561026 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 USP17L1Q7RTZ2 530 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 GMLQ99445 158 aa20.67■□□□□ 0.9
SNX1-213ENST00000561026 THSD7BQ9C0I4 1608 aa20.66■□□□□ 0.9
SNX1-213ENST00000561026 F6X3S4 739 aa20.66■□□□□ 0.9
SNX1-213ENST00000561026 BEGAINQ9BUH8 593 aa20.66■□□□□ 0.9
SNX1-213ENST00000561026 LEMD3Q9Y2U8 911 aa20.66■□□□□ 0.9
SNX1-213ENST00000561026 ADM5C9JUS6 153 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms