RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 LAMB2P55268 1798 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 SBF1O95248 1867 aa11.36□□□□□ -0.59
SNRPA1-214ENST00000560987 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 DDX60Q8IY21 1712 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 CSF1RP07333 972 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 CASP7P55210 303 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 EIF6P56537 245 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 GPSM2P81274 684 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 FOXO4P98177 505 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 AOC3Q16853 763 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 NIM1KQ8IY84 436 aa11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-214ENST00000560987 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 VEGFAP15692 232 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 FSTL1Q12841 308 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 EPHA10Q5JZY3 1008 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 SUCLG2Q96I99 432 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 EYA3Q99504 573 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 ZC3H12CQ9C0D7 883 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 USP44Q9H0E7 712 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 HDAC5Q9UQL6 1122 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
SNRPA1-214ENST00000560987 PLIN1O60240 522 aa11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 LDHAL6AQ6ZMR3 332 aa11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 GGA1Q9UJY5 639 aa11.33□□□□□ -0.6
SNRPA1-214ENST00000560987 UFL1O94874 794 aa11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 KCNJ4P48050 445 aa11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 ZNF594Q96JF6 807 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
SNRPA1-214ENST00000560987 TRIM27P14373 513 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 INTS3Q68E01 1043 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 TBC1D16Q8TBP0 767 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 ANKRD2Q9GZV1 360 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 ZNRF3Q9ULT6 936 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 UTYO14607 1347 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 XDHP47989 1333 aa11.31□□□□□ -0.6
SNRPA1-214ENST00000560987 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 FZD9O00144 591 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 GNAI3P08754 354 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 KIAA2012Q0VF49 1180 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 TNIP1Q15025 636 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 MYH3P11055 1940 aa11.3□□□□□ -0.6
SNRPA1-214ENST00000560987 TAF5LO75529 589 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 RAD17O75943 681 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 MS4A1P11836 297 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 CHRNDQ07001 517 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-214ENST00000560987 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 GPC2Q8N158 579 aa11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 MEIS3Q99687 375 aa11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 DICER1Q9UPY3 1922 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
SNRPA1-214ENST00000560987 IQCA1LA6NCM1 817 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 ECE2O60344 883 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 GNAI2P04899 355 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 CXCL9Q07325 125 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 ANKRD44Q8N8A2 993 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 PUS3Q9BZE2 481 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 HACL1Q9UJ83 578 aa11.27□□□□□ -0.61
SNRPA1-214ENST00000560987 ZNF804BA4D1E1 1349 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms