RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
USP8-212ENST00000560730 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
USP8-212ENST00000560730 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
USP8-212ENST00000560730 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
USP8-212ENST00000560730 ANKRD44Q8N8A2 993 aa15.24■□□□□ 0.03
USP8-212ENST00000560730 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
USP8-212ENST00000560730 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
USP8-212ENST00000560730 BICC1Q9H694 974 aaKnown RBP15.24■□□□□ 0.03
USP8-212ENST00000560730 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
USP8-212ENST00000560730 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
USP8-212ENST00000560730 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
USP8-212ENST00000560730 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
USP8-212ENST00000560730 CLUAP1Q96AJ1 413 aa15.23■□□□□ 0.03
USP8-212ENST00000560730 UFL1O94874 794 aa15.22■□□□□ 0.03
USP8-212ENST00000560730 INTS3Q68E01 1043 aaKnown RBP15.22■□□□□ 0.03
USP8-212ENST00000560730 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
USP8-212ENST00000560730 GGA1Q9UJY5 639 aa15.22■□□□□ 0.03
USP8-212ENST00000560730 XDHP47989 1333 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 A0A1B0GUL6 1792 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 YDJCA8MPS7 323 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
USP8-212ENST00000560730 EIF6P56537 245 aaKnown RBP15.21■□□□□ 0.03
USP8-212ENST00000560730 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 RABL6Q3YEC7 729 aaPredicted RBP15.21■□□□□ 0.03
USP8-212ENST00000560730 MEIS3Q99687 375 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 SCN9AQ15858 1988 aa15.21■□□□□ 0.03
USP8-212ENST00000560730 CXCL9Q07325 125 aa15.2■□□□□ 0.02
USP8-212ENST00000560730 DOK7Q18PE1 504 aa15.2■□□□□ 0.02
USP8-212ENST00000560730 ZKSCAN2Q63HK3 967 aa15.2■□□□□ 0.02
USP8-212ENST00000560730 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
USP8-212ENST00000560730 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
USP8-212ENST00000560730 DBNDD1Q9H9R9 158 aa15.2■□□□□ 0.02
USP8-212ENST00000560730 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
USP8-212ENST00000560730 SNAP23O00161 211 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
USP8-212ENST00000560730 ATP2B4P23634 1241 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 CHRNDQ07001 517 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 GPC2Q8N158 579 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 EYA3Q99504 573 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
USP8-212ENST00000560730 KCNQ5Q9NR82 932 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 SCN4AP35499 1836 aa15.19■□□□□ 0.02
USP8-212ENST00000560730 TAF5LO75529 589 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 RAD17O75943 681 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 RLBP1P12271 317 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
USP8-212ENST00000560730 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
USP8-212ENST00000560730 ECE2O60344 883 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 TOMM70O94826 608 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 KLRK1P26718 216 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 TXNRD3Q86VQ6 643 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
USP8-212ENST00000560730 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
USP8-212ENST00000560730 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
USP8-212ENST00000560730 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
USP8-212ENST00000560730 PLIN1O60240 522 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
USP8-212ENST00000560730 SCNN1DP51172 638 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
USP8-212ENST00000560730 TAF1DQ9H5J8 278 aaPredicted RBP15.16■□□□□ 0.02
USP8-212ENST00000560730 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 LEMD3Q9Y2U8 911 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 RIPOR2Q9Y4F9 1068 aa15.16■□□□□ 0.02
USP8-212ENST00000560730 ZNF804BA4D1E1 1349 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 PSMD14O00487 310 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 GNAI3P08754 354 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 EPS15P42566 896 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
USP8-212ENST00000560730 HACL1Q9UJ83 578 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 PSME4Q14997 1843 aa15.15■□□□□ 0.02
USP8-212ENST00000560730 MED23Q9ULK4 1368 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 IQCA1LA6NCM1 817 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 G3V3G9 751 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 GMPSP49915 693 aaPredicted RBP15.14■□□□□ 0.01
USP8-212ENST00000560730 TNIP1Q15025 636 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 PANK1Q8TE04 598 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
USP8-212ENST00000560730 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
USP8-212ENST00000560730 EPHX2P34913 555 aa15.13■□□□□ 0.01
USP8-212ENST00000560730 KCNJ4P48050 445 aa15.13■□□□□ 0.01
USP8-212ENST00000560730 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
USP8-212ENST00000560730 FTSJ3Q8IY81 847 aaKnown RBP15.13■□□□□ 0.01
USP8-212ENST00000560730 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
USP8-212ENST00000560730 EAPPQ56P03 285 aaPredicted RBP15.12■□□□□ 0.01
USP8-212ENST00000560730 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
USP8-212ENST00000560730 ZNF646O15015 1829 aaPredicted RBP15.12■□□□□ 0.01
USP8-212ENST00000560730 VIL1P09327 827 aaKnown RBP15.11■□□□□ 0.01
USP8-212ENST00000560730 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
USP8-212ENST00000560730 PA2G4Q9UQ80 394 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms