RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 UBN2Q6ZU65 1347 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 GOLIM4O00461 696 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 ITGA6P23229 1130 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 TSGA10IPQ3SY00 556 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 GORABQ5T7V8 394 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 BCL9LQ86UU0 1499 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 ARAP2Q8WZ64 1704 aa22.88■■□□□ 1.25
HMBOX1-215ENST00000560599 BRD1O95696 1058 aa22.87■■□□□ 1.25
HMBOX1-215ENST00000560599 ANKRD1Q15327 319 aa22.87■■□□□ 1.25
HMBOX1-215ENST00000560599 METTL24Q5JXM2 366 aa22.87■■□□□ 1.25
HMBOX1-215ENST00000560599 THSD7AQ9UPZ6 1657 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ITPK1Q13572 414 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 PKP1Q13835 747 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ATP2B3Q16720 1220 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ADCK5Q3MIX3 580 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 BLOC1S2Q6QNY1 142 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ALDH8A1Q9H2A2 487 aaPredicted RBP22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 GREM2Q9H772 168 aa22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ISY1Q9ULR0 285 aaKnown RBP22.86■■□□□ 1.25
HMBOX1-215ENST00000560599 ZMYM1Q5SVZ6 1142 aa22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 XAGE2Q96GT9 111 aa22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 CCDC85AQ96PX6 553 aaPredicted RBP22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 ZDHHC9Q9Y397 364 aa22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 RIPOR2Q9Y4F9 1068 aa22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 WDR33Q9C0J8 1336 aaKnown RBP22.85■■□□□ 1.25
HMBOX1-215ENST00000560599 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 CAMTA2O94983 1202 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 MCTP1Q6DN14 999 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 LDHAL6AQ6ZMR3 332 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 NGLY1Q96IV0 654 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 C8orf37Q96NL8 207 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 UTP14AQ9BVJ6 771 aaKnown RBP22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 CNNM1Q9NRU3 951 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 ZNF652Q9Y2D9 606 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 NDUFB9Q9Y6M9 179 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 RTL9Q8NET4 1388 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
HMBOX1-215ENST00000560599 RNF113AO15541 343 aaKnown RBP22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 ZFYP08048 801 aaPredicted RBP22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 KLHL40Q2TBA0 621 aa22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 KAT6BQ8WYB5 2073 aa22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 DDX60Q8IY21 1712 aaKnown RBP22.83■■□□□ 1.25
HMBOX1-215ENST00000560599 RGL2O15211 777 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 RPS6KB1P23443 525 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 GOLGA6L3A6NEY3 463 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 ADORA1P30542 326 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 MROH5Q6ZUA9 1318 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 SYNE4Q8N205 404 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 ZNF512BQ96KM6 892 aaPredicted RBP22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 SMC3Q9UQE7 1217 aa22.82■■□□□ 1.24
HMBOX1-215ENST00000560599 CPA1P15085 419 aa22.81■■□□□ 1.24
HMBOX1-215ENST00000560599 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
HMBOX1-215ENST00000560599 CNTNAP4Q9C0A0 1308 aa22.8■■□□□ 1.24
HMBOX1-215ENST00000560599 FSD2A1L4K1 749 aa22.8■■□□□ 1.24
HMBOX1-215ENST00000560599 SUSD4Q5VX71 490 aa22.8■■□□□ 1.24
HMBOX1-215ENST00000560599 CCDC129Q6ZRS4 1044 aa22.8■■□□□ 1.24
HMBOX1-215ENST00000560599 MAST3O60307 1309 aa22.79■■□□□ 1.24
HMBOX1-215ENST00000560599 VGLL2Q8N8G2 317 aa22.79■■□□□ 1.24
HMBOX1-215ENST00000560599 DDX49Q9Y6V7 483 aaKnown RBP22.79■■□□□ 1.24
HMBOX1-215ENST00000560599 MYH14Q7Z406 1995 aaKnown RBP22.79■■□□□ 1.24
HMBOX1-215ENST00000560599 PDIA4P13667 645 aaKnown RBP22.78■■□□□ 1.24
HMBOX1-215ENST00000560599 SEC62Q99442 399 aaKnown RBP22.78■■□□□ 1.24
HMBOX1-215ENST00000560599 LMBRD1Q9NUN5 540 aa22.78■■□□□ 1.24
HMBOX1-215ENST00000560599 NTSR2O95665 410 aa22.77■■□□□ 1.24
HMBOX1-215ENST00000560599 UQCRFS1P1P0C7P4 283 aa22.77■■□□□ 1.24
HMBOX1-215ENST00000560599 FKBP4Q02790 459 aaKnown RBP eCLIP22.77■■□□□ 1.24
HMBOX1-215ENST00000560599 CCDC152Q4G0S7 254 aa22.77■■□□□ 1.24
HMBOX1-215ENST00000560599 MYH7P12883 1935 aa22.77■■□□□ 1.24
HMBOX1-215ENST00000560599 KCNQ2O43526 872 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 PDE8BO95263 885 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 LARGE1O95461 756 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 HMGB1P09429 215 aaKnown RBP22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 PUM3Q15397 648 aaKnown RBP22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 ZSCAN25Q6NSZ9 544 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 CLEC4GQ6UXB4 293 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 CCDC83Q8IWF9 413 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 NEK1Q96PY6 1258 aa22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.76■■□□□ 1.231e-7■■■□□ 17.5
HMBOX1-215ENST00000560599 NIP7Q9Y221 180 aaKnown RBP eCLIP22.76■■□□□ 1.23
HMBOX1-215ENST00000560599 BTAF1O14981 1849 aa22.75■■□□□ 1.23
HMBOX1-215ENST00000560599 ATRNO75882 1429 aa22.75■■□□□ 1.23
HMBOX1-215ENST00000560599 MBD3O95983 291 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 SLC5A1P13866 664 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 LPIN2Q92539 896 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 APPBP2Q92624 585 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 USP21Q9UK80 565 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 CYP21A2P08686 494 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 ZAP70P43403 619 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 ME3Q16798 604 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 TPCN1Q9ULQ1 816 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 ATP6V1DQ9Y5K8 247 aa22.74■■□□□ 1.23
HMBOX1-215ENST00000560599 M0R2C6 588 aa22.73■■□□□ 1.23
HMBOX1-215ENST00000560599 STX6O43752 255 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms