RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
HERC1-206ENST00000559996 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
HERC1-206ENST00000559996 EXOC6BQ9Y2D4 811 aa11.67□□□□□ -0.54
HERC1-206ENST00000559996 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 HMMRO75330 724 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
HERC1-206ENST00000559996 CHRNA5P30532 468 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
HERC1-206ENST00000559996 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
HERC1-206ENST00000559996 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
HERC1-206ENST00000559996 EYA2O00167 538 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 PDE6BP35913 854 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
HERC1-206ENST00000559996 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
HERC1-206ENST00000559996 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
HERC1-206ENST00000559996 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
HERC1-206ENST00000559996 COL11A2P13942 1736 aaPredicted RBP11.65□□□□□ -0.54
HERC1-206ENST00000559996 LRP5O75197 1615 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
HERC1-206ENST00000559996 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 NPHP1O15259 732 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 CIAO1O76071 339 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 NPR1P16066 1061 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 POLD1P28340 1107 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 NUCB1Q02818 461 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 GRAPQ13588 217 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
HERC1-206ENST00000559996 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 SIL1Q9H173 461 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
HERC1-206ENST00000559996 A0A0G2JLW4 131 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
HERC1-206ENST00000559996 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 DPEP1P16444 411 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 PDE4AP27815 886 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 TGFB2P61812 414 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
HERC1-206ENST00000559996 C2CD5Q86YS7 1000 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
HERC1-206ENST00000559996 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
HERC1-206ENST00000559996 MINPP1Q9UNW1 487 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 CD2APQ9Y5K6 639 aa11.63□□□□□ -0.55
HERC1-206ENST00000559996 SALL3Q9BXA9 1300 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 H0YIN7 160 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 TFCP2Q12800 502 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
HERC1-206ENST00000559996 ANKRD45Q5TZF3 282 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
HERC1-206ENST00000559996 SLX4Q8IY92 1834 aa11.62□□□□□ -0.55
HERC1-206ENST00000559996 SNAP23O00161 211 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 BBOX1O75936 387 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 FGFR2P21802 821 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 IL15P40933 162 aaPredicted RBP11.61□□□□□ -0.55
HERC1-206ENST00000559996 CHRNDQ07001 517 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 CHD1LQ86WJ1 897 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
HERC1-206ENST00000559996 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
HERC1-206ENST00000559996 KIF1BPQ96EK5 621 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 IL1RAPL2Q9NP60 686 aa11.61□□□□□ -0.55
HERC1-206ENST00000559996 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 APBB1O00213 710 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 TAF5LO75529 589 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 IGHMBP2P38935 993 aaKnown RBP11.6□□□□□ -0.55
HERC1-206ENST00000559996 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
HERC1-206ENST00000559996 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
HERC1-206ENST00000559996 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
HERC1-206ENST00000559996 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
HERC1-206ENST00000559996 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
HERC1-206ENST00000559996 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 ATMINO43313 823 aaPredicted RBP11.59□□□□□ -0.55
HERC1-206ENST00000559996 PDE8BO95263 885 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 TIMM10P62072 90 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 CNNM1Q9NRU3 951 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 METRNQ9UJH8 293 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms